Protein–RNA interactions for Protein: P49454

CENPF, Centromere protein F, humanhuman

Predictions only

Length 3,210 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CENPFP49454 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CENPFP49454 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC20.55■□□□□ 0.88
CENPFP49454 AL139288.1-201ENST00000623748 933 ntBASIC20.55■□□□□ 0.88
CENPFP49454 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
CENPFP49454 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
CENPFP49454 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CENPFP49454 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CENPFP49454 ARRB2-203ENST00000381488 1236 ntTSL 2 BASIC20.54■□□□□ 0.88
CENPFP49454 PUDP-206ENST00000540122 825 ntTSL 2 BASIC20.54■□□□□ 0.88
CENPFP49454 CHRNA5-203ENST00000559554 1051 ntTSL 3 BASIC20.54■□□□□ 0.88
CENPFP49454 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CENPFP49454 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC20.54■□□□□ 0.88
CENPFP49454 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CENPFP49454 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CENPFP49454 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CENPFP49454 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC20.54■□□□□ 0.88
CENPFP49454 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC20.54■□□□□ 0.88
CENPFP49454 MTDHP4-201ENST00000600287 670 ntBASIC20.54■□□□□ 0.88
CENPFP49454 AC093512.1-201ENST00000617969 520 ntBASIC20.54■□□□□ 0.88
CENPFP49454 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CENPFP49454 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CENPFP49454 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC20.54■□□□□ 0.88
CENPFP49454 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CENPFP49454 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CENPFP49454 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC20.54■□□□□ 0.88
CENPFP49454 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC20.54■□□□□ 0.88
CENPFP49454 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC20.54■□□□□ 0.88
CENPFP49454 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CENPFP49454 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC20.53■□□□□ 0.88
CENPFP49454 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CENPFP49454 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC20.53■□□□□ 0.88
CENPFP49454 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC20.53■□□□□ 0.88
CENPFP49454 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC20.53■□□□□ 0.88
CENPFP49454 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CENPFP49454 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC20.53■□□□□ 0.88
CENPFP49454 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC20.53■□□□□ 0.88
CENPFP49454 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CENPFP49454 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
CENPFP49454 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC20.53■□□□□ 0.88
CENPFP49454 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CENPFP49454 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
CENPFP49454 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
CENPFP49454 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
CENPFP49454 PTMS-202ENST00000389462 773 ntTSL 2 BASIC20.53■□□□□ 0.88
CENPFP49454 ABCD1P5-201ENST00000445663 754 ntBASIC20.53■□□□□ 0.88
CENPFP49454 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC20.53■□□□□ 0.88
CENPFP49454 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC20.53■□□□□ 0.88
CENPFP49454 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC20.53■□□□□ 0.88
CENPFP49454 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC20.53■□□□□ 0.88
CENPFP49454 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CENPFP49454 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC20.53■□□□□ 0.88
CENPFP49454 KRT8P32-201ENST00000512863 1461 ntBASIC20.53■□□□□ 0.88
CENPFP49454 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CENPFP49454 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CENPFP49454 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
CENPFP49454 COPE-202ENST00000349893 948 ntTSL 2 BASIC20.53■□□□□ 0.88
CENPFP49454 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CENPFP49454 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC20.53■□□□□ 0.88
CENPFP49454 RBM7-207ENST00000544582 692 ntTSL 3 BASIC20.53■□□□□ 0.88
CENPFP49454 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC20.53■□□□□ 0.88
CENPFP49454 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC20.53■□□□□ 0.88
CENPFP49454 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
CENPFP49454 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC20.53■□□□□ 0.88
CENPFP49454 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC20.52■□□□□ 0.88
CENPFP49454 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CENPFP49454 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CENPFP49454 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC20.52■□□□□ 0.88
CENPFP49454 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
CENPFP49454 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC20.52■□□□□ 0.88
CENPFP49454 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
CENPFP49454 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
CENPFP49454 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
CENPFP49454 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CENPFP49454 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
CENPFP49454 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CENPFP49454 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CENPFP49454 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
CENPFP49454 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CENPFP49454 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC20.52■□□□□ 0.88
CENPFP49454 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC20.52■□□□□ 0.88
CENPFP49454 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CENPFP49454 AC190387.1-201ENST00000551683 408 ntBASIC20.52■□□□□ 0.88
CENPFP49454 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC20.52■□□□□ 0.88
CENPFP49454 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC20.52■□□□□ 0.88
CENPFP49454 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CENPFP49454 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
CENPFP49454 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.87
CENPFP49454 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC20.51■□□□□ 0.87
CENPFP49454 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC20.51■□□□□ 0.87
CENPFP49454 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
CENPFP49454 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CENPFP49454 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
CENPFP49454 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC20.51■□□□□ 0.87
CENPFP49454 AC011467.2-201ENST00000598425 242 ntBASIC20.51■□□□□ 0.87
CENPFP49454 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CENPFP49454 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC20.51■□□□□ 0.87
CENPFP49454 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CENPFP49454 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC20.51■□□□□ 0.87
CENPFP49454 CENPM-204ENST00000402420 688 ntTSL 5 BASIC20.51■□□□□ 0.87
CENPFP49454 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC20.51■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 19.2 ms