Protein–RNA interactions for Protein: P49427

CDC34, Ubiquitin-conjugating enzyme E2 R1, humanhuman

Predicted RBP Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC34P49427 AC006015.1-201ENST00000429970 570 ntBASIC14.46□□□□□ -0.09
CDC34P49427 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC14.46□□□□□ -0.09
CDC34P49427 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC14.46□□□□□ -0.09
CDC34P49427 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
CDC34P49427 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC14.46□□□□□ -0.09
CDC34P49427 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC14.46□□□□□ -0.09
CDC34P49427 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC14.46□□□□□ -0.09
CDC34P49427 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
CDC34P49427 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
CDC34P49427 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
CDC34P49427 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CDC34P49427 PP12613-201ENST00000424958 2230 ntBASIC14.46□□□□□ -0.1
CDC34P49427 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
CDC34P49427 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC14.46□□□□□ -0.1
CDC34P49427 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.1
CDC34P49427 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC14.46□□□□□ -0.1
CDC34P49427 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
CDC34P49427 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.1
CDC34P49427 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
CDC34P49427 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
CDC34P49427 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC14.45□□□□□ -0.1
CDC34P49427 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC14.45□□□□□ -0.1
CDC34P49427 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CDC34P49427 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
CDC34P49427 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CDC34P49427 AL096828.2-201ENST00000567259 1965 ntBASIC14.45□□□□□ -0.1
CDC34P49427 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CDC34P49427 NME9-203ENST00000383180 2133 ntTSL 2 BASIC14.45□□□□□ -0.1
CDC34P49427 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC14.45□□□□□ -0.1
CDC34P49427 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC14.45□□□□□ -0.1
CDC34P49427 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CDC34P49427 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
CDC34P49427 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CDC34P49427 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC14.45□□□□□ -0.1
CDC34P49427 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC14.45□□□□□ -0.1
CDC34P49427 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
CDC34P49427 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
CDC34P49427 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
CDC34P49427 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC14.45□□□□□ -0.1
CDC34P49427 MIR638-201ENST00000385237 100 ntBASIC14.45□□□□□ -0.1
CDC34P49427 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC14.45□□□□□ -0.1
CDC34P49427 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC14.45□□□□□ -0.1
CDC34P49427 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC14.45□□□□□ -0.1
CDC34P49427 OR2A1-AS1-201ENST00000462305 773 ntBASIC14.45□□□□□ -0.1
CDC34P49427 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC14.45□□□□□ -0.1
CDC34P49427 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC14.45□□□□□ -0.1
CDC34P49427 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC14.45□□□□□ -0.1
CDC34P49427 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
CDC34P49427 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC14.45□□□□□ -0.1
CDC34P49427 AC133552.2-202ENST00000575694 574 ntBASIC14.45□□□□□ -0.1
CDC34P49427 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC14.45□□□□□ -0.1
CDC34P49427 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC14.45□□□□□ -0.1
CDC34P49427 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC14.45□□□□□ -0.1
CDC34P49427 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC14.45□□□□□ -0.1
CDC34P49427 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
CDC34P49427 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CDC34P49427 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC14.45□□□□□ -0.1
CDC34P49427 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CDC34P49427 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
CDC34P49427 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC14.45□□□□□ -0.1
CDC34P49427 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC14.45□□□□□ -0.1
CDC34P49427 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC14.45□□□□□ -0.1
CDC34P49427 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
CDC34P49427 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC14.45□□□□□ -0.1
CDC34P49427 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
CDC34P49427 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
CDC34P49427 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
CDC34P49427 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC14.45□□□□□ -0.1
CDC34P49427 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
CDC34P49427 HARS-201ENST00000307633 1780 ntTSL 2 BASIC14.45□□□□□ -0.1
CDC34P49427 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
CDC34P49427 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
CDC34P49427 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CDC34P49427 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
CDC34P49427 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
CDC34P49427 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CDC34P49427 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
CDC34P49427 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CDC34P49427 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
CDC34P49427 BANP-227ENST00000626016 2144 ntTSL 2 BASIC14.44□□□□□ -0.1
CDC34P49427 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
CDC34P49427 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC14.44□□□□□ -0.1
CDC34P49427 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC14.44□□□□□ -0.1
CDC34P49427 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC14.44□□□□□ -0.1
CDC34P49427 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
CDC34P49427 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
CDC34P49427 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CDC34P49427 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
CDC34P49427 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC14.44□□□□□ -0.1
CDC34P49427 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
CDC34P49427 ZNRF2P3-201ENST00000424200 374 ntBASIC14.44□□□□□ -0.1
CDC34P49427 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC14.44□□□□□ -0.1
CDC34P49427 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC14.44□□□□□ -0.1
CDC34P49427 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
CDC34P49427 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC14.44□□□□□ -0.1
CDC34P49427 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC14.44□□□□□ -0.1
CDC34P49427 HLA-A-209ENST00000638375 975 ntBASIC14.44□□□□□ -0.1
CDC34P49427 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC14.44□□□□□ -0.1
CDC34P49427 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CDC34P49427 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms