Protein–RNA interactions for Protein: P48668

KRT6C, Keratin, type II cytoskeletal 6C, humanhuman

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT6CP48668 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC17.75■□□□□ 0.43
KRT6CP48668 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC17.75■□□□□ 0.43
KRT6CP48668 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
KRT6CP48668 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
KRT6CP48668 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
KRT6CP48668 AC138028.4-201ENST00000564984 1845 ntBASIC17.75■□□□□ 0.43
KRT6CP48668 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC17.74■□□□□ 0.43
KRT6CP48668 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
KRT6CP48668 KRT17P2-201ENST00000300992 1314 ntBASIC17.74■□□□□ 0.43
KRT6CP48668 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
KRT6CP48668 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC17.74■□□□□ 0.43
KRT6CP48668 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
KRT6CP48668 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
KRT6CP48668 REXO1L9P-201ENST00000604264 2108 ntBASIC17.74■□□□□ 0.43
KRT6CP48668 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
KRT6CP48668 GATB-213ENST00000515812 1893 ntTSL 5 BASIC17.74■□□□□ 0.43
KRT6CP48668 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
KRT6CP48668 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC17.74■□□□□ 0.43
KRT6CP48668 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
KRT6CP48668 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC17.74■□□□□ 0.43
KRT6CP48668 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
KRT6CP48668 MIR149-201ENST00000384879 89 ntBASIC17.74■□□□□ 0.43
KRT6CP48668 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC17.74■□□□□ 0.43
KRT6CP48668 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC17.74■□□□□ 0.43
KRT6CP48668 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC17.74■□□□□ 0.43
KRT6CP48668 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
KRT6CP48668 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC17.74■□□□□ 0.43
KRT6CP48668 AC009065.1-201ENST00000564055 1225 ntBASIC17.74■□□□□ 0.43
KRT6CP48668 C2orf69P3-201ENST00000565542 1120 ntBASIC17.74■□□□□ 0.43
KRT6CP48668 WWOX-216ENST00000569818 525 ntBASIC17.74■□□□□ 0.43
KRT6CP48668 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC17.74■□□□□ 0.43
KRT6CP48668 AP000525.1-201ENST00000608286 694 ntBASIC17.74■□□□□ 0.43
KRT6CP48668 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
KRT6CP48668 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
KRT6CP48668 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
KRT6CP48668 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
KRT6CP48668 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
KRT6CP48668 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC17.73■□□□□ 0.43
KRT6CP48668 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
KRT6CP48668 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
KRT6CP48668 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC17.73■□□□□ 0.43
KRT6CP48668 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
KRT6CP48668 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
KRT6CP48668 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC17.73■□□□□ 0.43
KRT6CP48668 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC17.73■□□□□ 0.43
KRT6CP48668 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
KRT6CP48668 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
KRT6CP48668 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
KRT6CP48668 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
KRT6CP48668 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
KRT6CP48668 PRR31-201ENST00000371629 978 ntTSL 2 BASIC17.73■□□□□ 0.43
KRT6CP48668 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC17.73■□□□□ 0.43
KRT6CP48668 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC17.73■□□□□ 0.43
KRT6CP48668 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC17.73■□□□□ 0.43
KRT6CP48668 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC17.73■□□□□ 0.43
KRT6CP48668 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC17.73■□□□□ 0.43
KRT6CP48668 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC17.73■□□□□ 0.43
KRT6CP48668 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC17.73■□□□□ 0.43
KRT6CP48668 CR769767.2-201ENST00000622735 460 ntBASIC17.73■□□□□ 0.43
KRT6CP48668 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
KRT6CP48668 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC17.73■□□□□ 0.43
KRT6CP48668 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
KRT6CP48668 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
KRT6CP48668 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC17.73■□□□□ 0.43
KRT6CP48668 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
KRT6CP48668 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
KRT6CP48668 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC17.73■□□□□ 0.43
KRT6CP48668 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
KRT6CP48668 AC092338.2-201ENST00000568827 1415 ntBASIC17.72■□□□□ 0.43
KRT6CP48668 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC17.72■□□□□ 0.43
KRT6CP48668 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC17.72■□□□□ 0.43
KRT6CP48668 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC17.72■□□□□ 0.43
KRT6CP48668 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
KRT6CP48668 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
KRT6CP48668 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC17.72■□□□□ 0.43
KRT6CP48668 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
KRT6CP48668 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
KRT6CP48668 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
KRT6CP48668 PXK-206ENST00000463280 2825 ntTSL 2 BASIC17.72■□□□□ 0.43
KRT6CP48668 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
KRT6CP48668 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
KRT6CP48668 AC008764.6-201ENST00000595909 2069 ntBASIC17.72■□□□□ 0.43
KRT6CP48668 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
KRT6CP48668 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC17.72■□□□□ 0.43
KRT6CP48668 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC17.72■□□□□ 0.43
KRT6CP48668 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC17.72■□□□□ 0.43
KRT6CP48668 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
KRT6CP48668 SLC25A6P5-201ENST00000435663 894 ntBASIC17.72■□□□□ 0.43
KRT6CP48668 PHB2-202ENST00000440277 996 ntTSL 5 BASIC17.72■□□□□ 0.43
KRT6CP48668 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
KRT6CP48668 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC17.72■□□□□ 0.43
KRT6CP48668 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC17.72■□□□□ 0.43
KRT6CP48668 NAT14-202ENST00000587400 416 ntTSL 5 BASIC17.72■□□□□ 0.43
KRT6CP48668 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC17.72■□□□□ 0.43
KRT6CP48668 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
KRT6CP48668 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC17.72■□□□□ 0.43
KRT6CP48668 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
KRT6CP48668 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC17.72■□□□□ 0.43
KRT6CP48668 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
KRT6CP48668 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC17.72■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms