Protein–RNA interactions for Protein: P48065

SLC6A12, Sodium- and chloride-dependent betaine transporter, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A12P48065 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SLC6A12P48065 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
SLC6A12P48065 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
SLC6A12P48065 CD276-203ENST00000537340 2439 ntTSL 2 BASIC17.64■□□□□ 0.42
SLC6A12P48065 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC17.64■□□□□ 0.42
SLC6A12P48065 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC17.64■□□□□ 0.42
SLC6A12P48065 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
SLC6A12P48065 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
SLC6A12P48065 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC17.64■□□□□ 0.41
SLC6A12P48065 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SLC6A12P48065 AP000997.3-201ENST00000623333 2250 ntBASIC17.64■□□□□ 0.41
SLC6A12P48065 STK4-201ENST00000372801 2038 ntTSL 2 BASIC17.64■□□□□ 0.41
SLC6A12P48065 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SLC6A12P48065 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SLC6A12P48065 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
SLC6A12P48065 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC17.64■□□□□ 0.41
SLC6A12P48065 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
SLC6A12P48065 AC005521.1-201ENST00000393351 872 ntBASIC17.64■□□□□ 0.41
SLC6A12P48065 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC17.64■□□□□ 0.41
SLC6A12P48065 BX664615.1-201ENST00000443558 458 ntBASIC17.64■□□□□ 0.41
SLC6A12P48065 RASA4DP-201ENST00000460726 1199 ntBASIC17.64■□□□□ 0.41
SLC6A12P48065 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC17.64■□□□□ 0.41
SLC6A12P48065 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC17.64■□□□□ 0.41
SLC6A12P48065 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC17.64■□□□□ 0.41
SLC6A12P48065 USF2-205ENST00000594064 1179 ntTSL 2 BASIC17.64■□□□□ 0.41
SLC6A12P48065 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
SLC6A12P48065 AC140113.3-201ENST00000605663 199 ntBASIC17.64■□□□□ 0.41
SLC6A12P48065 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC17.64■□□□□ 0.41
SLC6A12P48065 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
SLC6A12P48065 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SLC6A12P48065 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC17.64■□□□□ 0.41
SLC6A12P48065 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SLC6A12P48065 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
SLC6A12P48065 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
SLC6A12P48065 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC17.64■□□□□ 0.41
SLC6A12P48065 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC17.64■□□□□ 0.41
SLC6A12P48065 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC17.63■□□□□ 0.41
SLC6A12P48065 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SLC6A12P48065 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
SLC6A12P48065 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SLC6A12P48065 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
SLC6A12P48065 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
SLC6A12P48065 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SLC6A12P48065 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SLC6A12P48065 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SLC6A12P48065 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SLC6A12P48065 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC17.63■□□□□ 0.41
SLC6A12P48065 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC17.63■□□□□ 0.41
SLC6A12P48065 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC17.63■□□□□ 0.41
SLC6A12P48065 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
SLC6A12P48065 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC17.63■□□□□ 0.41
SLC6A12P48065 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC17.63■□□□□ 0.41
SLC6A12P48065 TK2-213ENST00000563369 882 ntTSL 5 BASIC17.63■□□□□ 0.41
SLC6A12P48065 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
SLC6A12P48065 AC139887.4-201ENST00000607877 719 ntBASIC17.63■□□□□ 0.41
SLC6A12P48065 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC17.63■□□□□ 0.41
SLC6A12P48065 AC011558.1-201ENST00000623459 338 ntBASIC17.63■□□□□ 0.41
SLC6A12P48065 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SLC6A12P48065 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
SLC6A12P48065 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC17.63■□□□□ 0.41
SLC6A12P48065 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SLC6A12P48065 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
SLC6A12P48065 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC17.63■□□□□ 0.41
SLC6A12P48065 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SLC6A12P48065 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
SLC6A12P48065 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC17.63■□□□□ 0.41
SLC6A12P48065 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SLC6A12P48065 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC17.63■□□□□ 0.41
SLC6A12P48065 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SLC6A12P48065 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SLC6A12P48065 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
SLC6A12P48065 HLA-DQB1-201ENST00000374943 1656 ntBASIC17.62■□□□□ 0.41
SLC6A12P48065 AC132938.6-201ENST00000623828 1655 ntBASIC17.62■□□□□ 0.41
SLC6A12P48065 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SLC6A12P48065 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SLC6A12P48065 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC17.62■□□□□ 0.41
SLC6A12P48065 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
SLC6A12P48065 SPDYE15P-201ENST00000424157 909 ntBASIC17.62■□□□□ 0.41
SLC6A12P48065 AC117947.1-201ENST00000427448 529 ntBASIC17.62■□□□□ 0.41
SLC6A12P48065 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SLC6A12P48065 YBX1P2-201ENST00000489612 999 ntBASIC17.62■□□□□ 0.41
SLC6A12P48065 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SLC6A12P48065 AC008687.5-201ENST00000593746 558 ntBASIC17.62■□□□□ 0.41
SLC6A12P48065 LINC01023-201ENST00000606054 436 ntBASIC17.62■□□□□ 0.41
SLC6A12P48065 AC079602.3-201ENST00000623931 403 ntBASIC17.62■□□□□ 0.41
SLC6A12P48065 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC17.62■□□□□ 0.41
SLC6A12P48065 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
SLC6A12P48065 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SLC6A12P48065 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SLC6A12P48065 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SLC6A12P48065 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SLC6A12P48065 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
SLC6A12P48065 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
SLC6A12P48065 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SLC6A12P48065 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
SLC6A12P48065 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
SLC6A12P48065 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
SLC6A12P48065 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC17.61■□□□□ 0.41
SLC6A12P48065 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
SLC6A12P48065 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 44.4 ms