Protein–RNA interactions for Protein: P41229

KDM5C, Lysine-specific demethylase 5C, humanhuman

Predictions only

Length 1,560 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDM5CP41229 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC27.27■■□□□ 1.96
KDM5CP41229 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC27.26■■□□□ 1.96
KDM5CP41229 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC27.26■■□□□ 1.96
KDM5CP41229 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC27.26■■□□□ 1.96
KDM5CP41229 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC27.26■■□□□ 1.96
KDM5CP41229 RPS15-207ENST00000591032 550 ntTSL 3 BASIC27.26■■□□□ 1.96
KDM5CP41229 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC27.26■■□□□ 1.96
KDM5CP41229 AP000867.4-201ENST00000641616 219 ntBASIC27.26■■□□□ 1.96
KDM5CP41229 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC27.26■■□□□ 1.96
KDM5CP41229 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC27.26■■□□□ 1.95
KDM5CP41229 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
KDM5CP41229 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC27.26■■□□□ 1.95
KDM5CP41229 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
KDM5CP41229 SOD2-201ENST00000337404 991 ntTSL 2 BASIC27.26■■□□□ 1.95
KDM5CP41229 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
KDM5CP41229 MCCD1P2-201ENST00000423228 335 ntBASIC27.26■■□□□ 1.95
KDM5CP41229 KRT18P65-201ENST00000439811 1286 ntBASIC27.26■■□□□ 1.95
KDM5CP41229 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC27.26■■□□□ 1.95
KDM5CP41229 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC27.26■■□□□ 1.95
KDM5CP41229 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC27.26■■□□□ 1.95
KDM5CP41229 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC27.26■■□□□ 1.95
KDM5CP41229 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC27.26■■□□□ 1.95
KDM5CP41229 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC27.26■■□□□ 1.95
KDM5CP41229 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC27.25■■□□□ 1.95
KDM5CP41229 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC27.25■■□□□ 1.95
KDM5CP41229 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC27.25■■□□□ 1.95
KDM5CP41229 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
KDM5CP41229 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
KDM5CP41229 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
KDM5CP41229 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
KDM5CP41229 AC023274.1-201ENST00000418278 595 ntBASIC27.25■■□□□ 1.95
KDM5CP41229 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC27.25■■□□□ 1.95
KDM5CP41229 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC27.25■■□□□ 1.95
KDM5CP41229 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC27.25■■□□□ 1.95
KDM5CP41229 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
KDM5CP41229 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
KDM5CP41229 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC27.24■■□□□ 1.95
KDM5CP41229 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC27.24■■□□□ 1.95
KDM5CP41229 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
KDM5CP41229 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
KDM5CP41229 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC27.24■■□□□ 1.95
KDM5CP41229 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC27.24■■□□□ 1.95
KDM5CP41229 AC211486.1-202ENST00000416371 468 ntBASIC27.24■■□□□ 1.95
KDM5CP41229 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC27.24■■□□□ 1.95
KDM5CP41229 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC27.24■■□□□ 1.95
KDM5CP41229 AC211476.1-201ENST00000503899 468 ntBASIC27.24■■□□□ 1.95
KDM5CP41229 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC27.24■■□□□ 1.95
KDM5CP41229 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC27.24■■□□□ 1.95
KDM5CP41229 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC27.24■■□□□ 1.95
KDM5CP41229 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
KDM5CP41229 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC27.23■■□□□ 1.95
KDM5CP41229 AC002310.6-201ENST00000624451 1377 ntBASIC27.23■■□□□ 1.95
KDM5CP41229 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
KDM5CP41229 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC27.23■■□□□ 1.95
KDM5CP41229 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
KDM5CP41229 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC27.23■■□□□ 1.95
KDM5CP41229 MTDHP5-201ENST00000598980 586 ntBASIC27.23■■□□□ 1.95
KDM5CP41229 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC27.23■■□□□ 1.95
KDM5CP41229 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC27.23■■□□□ 1.95
KDM5CP41229 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC27.23■■□□□ 1.95
KDM5CP41229 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
KDM5CP41229 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC27.23■■□□□ 1.95
KDM5CP41229 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC27.23■■□□□ 1.95
KDM5CP41229 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC27.23■■□□□ 1.95
KDM5CP41229 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC27.23■■□□□ 1.95
KDM5CP41229 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC27.22■■□□□ 1.95
KDM5CP41229 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
KDM5CP41229 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC27.22■■□□□ 1.95
KDM5CP41229 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC27.22■■□□□ 1.95
KDM5CP41229 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC27.22■■□□□ 1.95
KDM5CP41229 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC27.22■■□□□ 1.95
KDM5CP41229 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC27.22■■□□□ 1.95
KDM5CP41229 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC27.22■■□□□ 1.95
KDM5CP41229 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC27.22■■□□□ 1.95
KDM5CP41229 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC27.22■■□□□ 1.95
KDM5CP41229 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC27.22■■□□□ 1.95
KDM5CP41229 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC27.22■■□□□ 1.95
KDM5CP41229 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC27.22■■□□□ 1.95
KDM5CP41229 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
KDM5CP41229 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC27.22■■□□□ 1.95
KDM5CP41229 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC27.22■■□□□ 1.95
KDM5CP41229 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC27.22■■□□□ 1.95
KDM5CP41229 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC27.22■■□□□ 1.95
KDM5CP41229 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC27.22■■□□□ 1.95
KDM5CP41229 AC108751.1-201ENST00000490852 363 ntBASIC27.22■■□□□ 1.95
KDM5CP41229 MIR3197-201ENST00000582241 73 ntBASIC27.22■■□□□ 1.95
KDM5CP41229 SDCCAG3P1-201ENST00000589292 1150 ntBASIC27.22■■□□□ 1.95
KDM5CP41229 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC27.22■■□□□ 1.95
KDM5CP41229 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC27.21■■□□□ 1.95
KDM5CP41229 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC27.21■■□□□ 1.95
KDM5CP41229 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC27.21■■□□□ 1.95
KDM5CP41229 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC27.21■■□□□ 1.95
KDM5CP41229 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC27.21■■□□□ 1.95
KDM5CP41229 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC27.21■■□□□ 1.95
KDM5CP41229 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
KDM5CP41229 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC27.21■■□□□ 1.95
KDM5CP41229 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC27.21■■□□□ 1.95
KDM5CP41229 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC27.21■■□□□ 1.95
KDM5CP41229 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC27.21■■□□□ 1.95
KDM5CP41229 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC27.21■■□□□ 1.95
Retrieved 100 of 98,524 protein–RNA pairs in 18.2 ms