Protein–RNA interactions for Protein: P40818

USP8, Ubiquitin carboxyl-terminal hydrolase 8, humanhuman

Predictions only

Length 1,118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP8P40818 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
USP8P40818 CYP2D8P-201ENST00000433633 1490 ntBASIC19.92■□□□□ 0.78
USP8P40818 AC135050.7-201ENST00000624508 2218 ntBASIC19.92■□□□□ 0.78
USP8P40818 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
USP8P40818 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
USP8P40818 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
USP8P40818 MYLKP1-201ENST00000509077 1580 ntBASIC19.92■□□□□ 0.78
USP8P40818 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
USP8P40818 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
USP8P40818 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
USP8P40818 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
USP8P40818 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC19.92■□□□□ 0.78
USP8P40818 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
USP8P40818 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC19.92■□□□□ 0.78
USP8P40818 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC19.92■□□□□ 0.78
USP8P40818 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC19.92■□□□□ 0.78
USP8P40818 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
USP8P40818 BX088651.1-201ENST00000540551 451 ntBASIC19.92■□□□□ 0.78
USP8P40818 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
USP8P40818 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC19.92■□□□□ 0.78
USP8P40818 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
USP8P40818 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
USP8P40818 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC19.92■□□□□ 0.78
USP8P40818 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
USP8P40818 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
USP8P40818 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
USP8P40818 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
USP8P40818 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC19.92■□□□□ 0.78
USP8P40818 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
USP8P40818 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC19.92■□□□□ 0.78
USP8P40818 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
USP8P40818 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
USP8P40818 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC19.92■□□□□ 0.78
USP8P40818 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC19.92■□□□□ 0.78
USP8P40818 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
USP8P40818 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC19.92■□□□□ 0.78
USP8P40818 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
USP8P40818 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
USP8P40818 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
USP8P40818 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
USP8P40818 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
USP8P40818 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC19.91■□□□□ 0.78
USP8P40818 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
USP8P40818 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
USP8P40818 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC19.91■□□□□ 0.78
USP8P40818 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
USP8P40818 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
USP8P40818 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC19.91■□□□□ 0.78
USP8P40818 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
USP8P40818 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
USP8P40818 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
USP8P40818 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
USP8P40818 MMP23A-201ENST00000234610 1017 ntBASIC19.91■□□□□ 0.78
USP8P40818 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC19.91■□□□□ 0.78
USP8P40818 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
USP8P40818 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC19.91■□□□□ 0.78
USP8P40818 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC19.91■□□□□ 0.78
USP8P40818 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
USP8P40818 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC19.91■□□□□ 0.78
USP8P40818 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC19.91■□□□□ 0.78
USP8P40818 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC19.91■□□□□ 0.78
USP8P40818 GLDC-219ENST00000640208 420 ntTSL 2 BASIC19.91■□□□□ 0.78
USP8P40818 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC19.91■□□□□ 0.78
USP8P40818 AC092338.2-201ENST00000568827 1415 ntBASIC19.91■□□□□ 0.78
USP8P40818 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
USP8P40818 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
USP8P40818 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
USP8P40818 AC034236.2-201ENST00000606662 1610 ntBASIC19.91■□□□□ 0.78
USP8P40818 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
USP8P40818 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC19.9■□□□□ 0.78
USP8P40818 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC19.9■□□□□ 0.78
USP8P40818 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
USP8P40818 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
USP8P40818 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
USP8P40818 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
USP8P40818 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
USP8P40818 PRORSD1P-202ENST00000563365 2154 ntBASIC19.9■□□□□ 0.78
USP8P40818 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
USP8P40818 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
USP8P40818 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
USP8P40818 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
USP8P40818 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC19.9■□□□□ 0.78
USP8P40818 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC19.9■□□□□ 0.78
USP8P40818 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
USP8P40818 INGX-201ENST00000359239 846 ntBASIC19.9■□□□□ 0.78
USP8P40818 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC19.9■□□□□ 0.78
USP8P40818 AC007663.1-201ENST00000438948 1240 ntBASIC19.9■□□□□ 0.78
USP8P40818 NAPSB-206ENST00000562112 1266 ntBASIC19.9■□□□□ 0.78
USP8P40818 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC19.9■□□□□ 0.78
USP8P40818 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC19.9■□□□□ 0.78
USP8P40818 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC19.9■□□□□ 0.78
USP8P40818 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC19.9■□□□□ 0.78
USP8P40818 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
USP8P40818 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
USP8P40818 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
USP8P40818 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
USP8P40818 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
USP8P40818 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
USP8P40818 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
USP8P40818 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 56.7 ms