Protein–RNA interactions for Protein: P35913

PDE6B, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, humanhuman

Predictions only

Length 854 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6BP35913 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
PDE6BP35913 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
PDE6BP35913 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
PDE6BP35913 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
PDE6BP35913 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC22.46■■□□□ 1.19
PDE6BP35913 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC22.46■■□□□ 1.19
PDE6BP35913 AP002414.3-201ENST00000589352 1468 ntBASIC22.46■■□□□ 1.19
PDE6BP35913 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
PDE6BP35913 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC22.46■■□□□ 1.19
PDE6BP35913 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC22.46■■□□□ 1.19
PDE6BP35913 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
PDE6BP35913 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC22.46■■□□□ 1.19
PDE6BP35913 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC22.46■■□□□ 1.19
PDE6BP35913 AC099343.3-201ENST00000605834 2503 ntBASIC22.46■■□□□ 1.19
PDE6BP35913 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
PDE6BP35913 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
PDE6BP35913 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
PDE6BP35913 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
PDE6BP35913 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
PDE6BP35913 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC22.45■■□□□ 1.18
PDE6BP35913 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC22.45■■□□□ 1.18
PDE6BP35913 KIRREL3-AS3-201ENST00000404882 831 ntBASIC22.45■■□□□ 1.18
PDE6BP35913 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC22.45■■□□□ 1.18
PDE6BP35913 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC22.45■■□□□ 1.18
PDE6BP35913 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC22.45■■□□□ 1.18
PDE6BP35913 AC002347.1-201ENST00000569543 541 ntBASIC22.45■■□□□ 1.18
PDE6BP35913 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
PDE6BP35913 LINC02084-201ENST00000606069 1096 ntBASIC22.45■■□□□ 1.18
PDE6BP35913 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC22.45■■□□□ 1.18
PDE6BP35913 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC22.45■■□□□ 1.18
PDE6BP35913 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
PDE6BP35913 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
PDE6BP35913 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC22.45■■□□□ 1.18
PDE6BP35913 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
PDE6BP35913 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC22.45■■□□□ 1.18
PDE6BP35913 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC22.45■■□□□ 1.18
PDE6BP35913 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC22.44■■□□□ 1.18
PDE6BP35913 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC22.44■■□□□ 1.18
PDE6BP35913 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
PDE6BP35913 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
PDE6BP35913 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC22.44■■□□□ 1.18
PDE6BP35913 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC22.44■■□□□ 1.18
PDE6BP35913 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
PDE6BP35913 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
PDE6BP35913 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC22.44■■□□□ 1.18
PDE6BP35913 CD9-202ENST00000382515 1229 ntTSL 5 BASIC22.44■■□□□ 1.18
PDE6BP35913 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
PDE6BP35913 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
PDE6BP35913 COA5-202ENST00000409997 557 ntTSL 4 BASIC22.44■■□□□ 1.18
PDE6BP35913 LAGE3P1-201ENST00000425356 484 ntBASIC22.44■■□□□ 1.18
PDE6BP35913 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC22.44■■□□□ 1.18
PDE6BP35913 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC22.44■■□□□ 1.18
PDE6BP35913 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC22.44■■□□□ 1.18
PDE6BP35913 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC22.44■■□□□ 1.18
PDE6BP35913 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC22.44■■□□□ 1.18
PDE6BP35913 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC22.44■■□□□ 1.18
PDE6BP35913 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
PDE6BP35913 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC22.44■■□□□ 1.18
PDE6BP35913 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
PDE6BP35913 RPS29-206ENST00000557111 488 ntTSL 2 BASIC22.44■■□□□ 1.18
PDE6BP35913 COX5A-202ENST00000562233 441 ntTSL 3 BASIC22.44■■□□□ 1.18
PDE6BP35913 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC22.44■■□□□ 1.18
PDE6BP35913 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC22.44■■□□□ 1.18
PDE6BP35913 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
PDE6BP35913 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC22.44■■□□□ 1.18
PDE6BP35913 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC22.44■■□□□ 1.18
PDE6BP35913 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC22.43■■□□□ 1.18
PDE6BP35913 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC22.43■■□□□ 1.18
PDE6BP35913 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
PDE6BP35913 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC22.43■■□□□ 1.18
PDE6BP35913 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
PDE6BP35913 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC22.43■■□□□ 1.18
PDE6BP35913 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
PDE6BP35913 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
PDE6BP35913 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
PDE6BP35913 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
PDE6BP35913 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
PDE6BP35913 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
PDE6BP35913 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC22.43■■□□□ 1.18
PDE6BP35913 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC22.43■■□□□ 1.18
PDE6BP35913 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC22.43■■□□□ 1.18
PDE6BP35913 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
PDE6BP35913 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC22.43■■□□□ 1.18
PDE6BP35913 CRCP-205ENST00000431089 942 ntTSL 2 BASIC22.43■■□□□ 1.18
PDE6BP35913 AC007967.2-201ENST00000432613 625 ntBASIC22.43■■□□□ 1.18
PDE6BP35913 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
PDE6BP35913 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC22.43■■□□□ 1.18
PDE6BP35913 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC22.43■■□□□ 1.18
PDE6BP35913 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC22.43■■□□□ 1.18
PDE6BP35913 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC22.43■■□□□ 1.18
PDE6BP35913 RNF151-202ENST00000569210 853 ntTSL 2 BASIC22.43■■□□□ 1.18
PDE6BP35913 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
PDE6BP35913 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC22.43■■□□□ 1.18
PDE6BP35913 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC22.43■■□□□ 1.18
PDE6BP35913 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC22.43■■□□□ 1.18
PDE6BP35913 AP000867.4-201ENST00000641616 219 ntBASIC22.43■■□□□ 1.18
PDE6BP35913 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC22.43■■□□□ 1.18
PDE6BP35913 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
PDE6BP35913 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC22.43■■□□□ 1.18
PDE6BP35913 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC22.43■■□□□ 1.18
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms