Protein–RNA interactions for Protein: P30408

TM4SF1, Transmembrane 4 L6 family member 1, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF1P30408 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
TM4SF1P30408 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC22.68■■□□□ 1.22
TM4SF1P30408 CYGB-205ENST00000590175 830 ntTSL 3 BASIC22.68■■□□□ 1.22
TM4SF1P30408 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC22.68■■□□□ 1.22
TM4SF1P30408 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC22.68■■□□□ 1.22
TM4SF1P30408 LINC01126-201ENST00000623515 1646 ntBASIC22.68■■□□□ 1.22
TM4SF1P30408 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
TM4SF1P30408 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
TM4SF1P30408 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC22.67■■□□□ 1.22
TM4SF1P30408 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC22.67■■□□□ 1.22
TM4SF1P30408 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
TM4SF1P30408 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC22.67■■□□□ 1.22
TM4SF1P30408 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC22.67■■□□□ 1.22
TM4SF1P30408 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC22.67■■□□□ 1.22
TM4SF1P30408 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
TM4SF1P30408 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC22.67■■□□□ 1.22
TM4SF1P30408 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC22.67■■□□□ 1.22
TM4SF1P30408 KRT18P65-201ENST00000439811 1286 ntBASIC22.67■■□□□ 1.22
TM4SF1P30408 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC22.67■■□□□ 1.22
TM4SF1P30408 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC22.67■■□□□ 1.22
TM4SF1P30408 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
TM4SF1P30408 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC22.67■■□□□ 1.22
TM4SF1P30408 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC22.67■■□□□ 1.22
TM4SF1P30408 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC22.67■■□□□ 1.22
TM4SF1P30408 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC22.67■■□□□ 1.22
TM4SF1P30408 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC22.67■■□□□ 1.22
TM4SF1P30408 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC22.67■■□□□ 1.22
TM4SF1P30408 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC22.66■■□□□ 1.22
TM4SF1P30408 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC22.66■■□□□ 1.22
TM4SF1P30408 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC22.66■■□□□ 1.22
TM4SF1P30408 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC22.66■■□□□ 1.22
TM4SF1P30408 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC22.66■■□□□ 1.22
TM4SF1P30408 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
TM4SF1P30408 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC22.66■■□□□ 1.22
TM4SF1P30408 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC22.66■■□□□ 1.22
TM4SF1P30408 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
TM4SF1P30408 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC22.66■■□□□ 1.22
TM4SF1P30408 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
TM4SF1P30408 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
TM4SF1P30408 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC22.66■■□□□ 1.22
TM4SF1P30408 COA5-202ENST00000409997 557 ntTSL 4 BASIC22.66■■□□□ 1.22
TM4SF1P30408 DNAJB3-202ENST00000449667 1266 ntBASIC22.66■■□□□ 1.22
TM4SF1P30408 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC22.66■■□□□ 1.22
TM4SF1P30408 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC22.66■■□□□ 1.22
TM4SF1P30408 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC22.66■■□□□ 1.22
TM4SF1P30408 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC22.66■■□□□ 1.22
TM4SF1P30408 RNF151-202ENST00000569210 853 ntTSL 2 BASIC22.66■■□□□ 1.22
TM4SF1P30408 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
TM4SF1P30408 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC22.66■■□□□ 1.22
TM4SF1P30408 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC22.66■■□□□ 1.22
TM4SF1P30408 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC22.66■■□□□ 1.22
TM4SF1P30408 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC22.66■■□□□ 1.22
TM4SF1P30408 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC22.66■■□□□ 1.22
TM4SF1P30408 AL161938.1-201ENST00000569833 2180 ntBASIC22.66■■□□□ 1.22
TM4SF1P30408 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
TM4SF1P30408 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
TM4SF1P30408 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC22.65■■□□□ 1.22
TM4SF1P30408 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
TM4SF1P30408 AL049812.1-201ENST00000432563 2267 ntBASIC22.65■■□□□ 1.22
TM4SF1P30408 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC22.65■■□□□ 1.22
TM4SF1P30408 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
TM4SF1P30408 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC22.65■■□□□ 1.22
TM4SF1P30408 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC22.65■■□□□ 1.22
TM4SF1P30408 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC22.65■■□□□ 1.22
TM4SF1P30408 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC22.65■■□□□ 1.22
TM4SF1P30408 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC22.65■■□□□ 1.22
TM4SF1P30408 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC22.65■■□□□ 1.22
TM4SF1P30408 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC22.65■■□□□ 1.22
TM4SF1P30408 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC22.65■■□□□ 1.22
TM4SF1P30408 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC22.65■■□□□ 1.22
TM4SF1P30408 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
TM4SF1P30408 ADK-206ENST00000541550 2222 ntTSL 2 BASIC22.65■■□□□ 1.22
TM4SF1P30408 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC22.64■■□□□ 1.22
TM4SF1P30408 SNAI3-AS1-205ENST00000568633 2096 ntBASIC22.64■■□□□ 1.22
TM4SF1P30408 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
TM4SF1P30408 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC22.64■■□□□ 1.22
TM4SF1P30408 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC22.64■■□□□ 1.22
TM4SF1P30408 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
TM4SF1P30408 CD9-202ENST00000382515 1229 ntTSL 5 BASIC22.64■■□□□ 1.21
TM4SF1P30408 AC023274.1-201ENST00000418278 595 ntBASIC22.64■■□□□ 1.21
TM4SF1P30408 LAGE3P1-201ENST00000425356 484 ntBASIC22.64■■□□□ 1.21
TM4SF1P30408 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC22.64■■□□□ 1.21
TM4SF1P30408 CRCP-205ENST00000431089 942 ntTSL 2 BASIC22.64■■□□□ 1.21
TM4SF1P30408 SRP19-202ENST00000445150 833 ntTSL 2 BASIC22.64■■□□□ 1.21
TM4SF1P30408 AC112698.1-201ENST00000510299 916 ntBASIC22.64■■□□□ 1.21
TM4SF1P30408 RPS29-206ENST00000557111 488 ntTSL 2 BASIC22.64■■□□□ 1.21
TM4SF1P30408 AC002347.1-201ENST00000569543 541 ntBASIC22.64■■□□□ 1.21
TM4SF1P30408 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
TM4SF1P30408 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC22.64■■□□□ 1.21
TM4SF1P30408 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
TM4SF1P30408 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
TM4SF1P30408 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC22.64■■□□□ 1.21
TM4SF1P30408 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
TM4SF1P30408 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
TM4SF1P30408 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC22.63■■□□□ 1.21
TM4SF1P30408 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
TM4SF1P30408 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
TM4SF1P30408 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
TM4SF1P30408 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC22.63■■□□□ 1.21
TM4SF1P30408 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC22.63■■□□□ 1.21
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms