Protein–RNA interactions for Protein: P28288

ABCD3, ATP-binding cassette sub-family D member 3, humanhuman

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD3P28288 FAM86EP-206ENST00000510506 987 ntBASIC16.84■□□□□ 0.29
ABCD3P28288 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC16.84■□□□□ 0.29
ABCD3P28288 TPM1-226ENST00000560959 925 ntTSL 2 BASIC16.84■□□□□ 0.29
ABCD3P28288 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC16.84■□□□□ 0.29
ABCD3P28288 TK1-205ENST00000590862 642 ntTSL 3 BASIC16.84■□□□□ 0.29
ABCD3P28288 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
ABCD3P28288 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
ABCD3P28288 PODN-203ENST00000395871 2744 ntTSL 5 BASIC16.84■□□□□ 0.29
ABCD3P28288 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
ABCD3P28288 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
ABCD3P28288 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
ABCD3P28288 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
ABCD3P28288 LINC01126-201ENST00000623515 1646 ntBASIC16.84■□□□□ 0.29
ABCD3P28288 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
ABCD3P28288 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
ABCD3P28288 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
ABCD3P28288 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC16.84■□□□□ 0.29
ABCD3P28288 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
ABCD3P28288 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
ABCD3P28288 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
ABCD3P28288 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
ABCD3P28288 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC16.84■□□□□ 0.29
ABCD3P28288 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.29
ABCD3P28288 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.29
ABCD3P28288 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC16.83■□□□□ 0.29
ABCD3P28288 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
ABCD3P28288 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
ABCD3P28288 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
ABCD3P28288 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC16.83■□□□□ 0.28
ABCD3P28288 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
ABCD3P28288 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC16.83■□□□□ 0.28
ABCD3P28288 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
ABCD3P28288 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC16.83■□□□□ 0.28
ABCD3P28288 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
ABCD3P28288 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
ABCD3P28288 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
ABCD3P28288 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
ABCD3P28288 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC16.83■□□□□ 0.28
ABCD3P28288 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
ABCD3P28288 AL645929.1-201ENST00000420084 975 ntBASIC16.83■□□□□ 0.28
ABCD3P28288 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
ABCD3P28288 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
ABCD3P28288 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
ABCD3P28288 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC16.83■□□□□ 0.28
ABCD3P28288 AC005332.1-201ENST00000577698 1310 ntBASIC16.83■□□□□ 0.28
ABCD3P28288 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC16.83■□□□□ 0.28
ABCD3P28288 AC008687.5-201ENST00000593746 558 ntBASIC16.83■□□□□ 0.28
ABCD3P28288 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC16.83■□□□□ 0.28
ABCD3P28288 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC16.83■□□□□ 0.28
ABCD3P28288 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
ABCD3P28288 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC16.83■□□□□ 0.28
ABCD3P28288 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
ABCD3P28288 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
ABCD3P28288 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC16.83■□□□□ 0.28
ABCD3P28288 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC16.83■□□□□ 0.28
ABCD3P28288 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
ABCD3P28288 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC16.82■□□□□ 0.28
ABCD3P28288 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
ABCD3P28288 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC16.82■□□□□ 0.28
ABCD3P28288 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
ABCD3P28288 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
ABCD3P28288 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC16.82■□□□□ 0.28
ABCD3P28288 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC16.82■□□□□ 0.28
ABCD3P28288 AL162741.1-201ENST00000565563 1558 ntBASIC16.82■□□□□ 0.28
ABCD3P28288 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC16.82■□□□□ 0.28
ABCD3P28288 KRT89P-201ENST00000620027 1478 ntBASIC16.82■□□□□ 0.28
ABCD3P28288 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
ABCD3P28288 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
ABCD3P28288 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC16.82■□□□□ 0.28
ABCD3P28288 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
ABCD3P28288 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
ABCD3P28288 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC16.82■□□□□ 0.28
ABCD3P28288 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
ABCD3P28288 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC16.82■□□□□ 0.28
ABCD3P28288 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
ABCD3P28288 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
ABCD3P28288 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
ABCD3P28288 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
ABCD3P28288 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
ABCD3P28288 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
ABCD3P28288 KRT18P48-201ENST00000434763 852 ntBASIC16.82■□□□□ 0.28
ABCD3P28288 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC16.82■□□□□ 0.28
ABCD3P28288 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC16.82■□□□□ 0.28
ABCD3P28288 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC16.82■□□□□ 0.28
ABCD3P28288 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC16.82■□□□□ 0.28
ABCD3P28288 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC16.82■□□□□ 0.28
ABCD3P28288 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
ABCD3P28288 TEN1-204ENST00000588202 862 ntTSL 3 BASIC16.82■□□□□ 0.28
ABCD3P28288 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
ABCD3P28288 DBP-204ENST00000599385 709 ntTSL 3 BASIC16.82■□□□□ 0.28
ABCD3P28288 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
ABCD3P28288 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC16.82■□□□□ 0.28
ABCD3P28288 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC16.82■□□□□ 0.28
ABCD3P28288 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC16.82■□□□□ 0.28
ABCD3P28288 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC16.82■□□□□ 0.28
ABCD3P28288 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC16.82■□□□□ 0.28
ABCD3P28288 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
ABCD3P28288 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
ABCD3P28288 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
ABCD3P28288 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC16.81■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms