Protein–RNA interactions for Protein: P19256

CD58, Lymphocyte function-associated antigen 3, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD58P19256 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CD58P19256 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CD58P19256 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CD58P19256 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC19.64■□□□□ 0.73
CD58P19256 HOMER2P1-201ENST00000455653 964 ntBASIC19.64■□□□□ 0.73
CD58P19256 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CD58P19256 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC19.64■□□□□ 0.73
CD58P19256 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC19.64■□□□□ 0.73
CD58P19256 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CD58P19256 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC19.64■□□□□ 0.73
CD58P19256 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CD58P19256 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
CD58P19256 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CD58P19256 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
CD58P19256 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CD58P19256 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC19.64■□□□□ 0.73
CD58P19256 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CD58P19256 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC19.64■□□□□ 0.73
CD58P19256 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC19.64■□□□□ 0.73
CD58P19256 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC19.64■□□□□ 0.73
CD58P19256 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CD58P19256 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CD58P19256 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
CD58P19256 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC19.63■□□□□ 0.73
CD58P19256 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CD58P19256 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC19.63■□□□□ 0.73
CD58P19256 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CD58P19256 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC19.63■□□□□ 0.73
CD58P19256 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CD58P19256 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC19.63■□□□□ 0.73
CD58P19256 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC19.63■□□□□ 0.73
CD58P19256 ESPNP-201ENST00000270691 2015 ntBASIC19.63■□□□□ 0.73
CD58P19256 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CD58P19256 PBK-203ENST00000522944 1499 ntTSL 2 BASIC19.63■□□□□ 0.73
CD58P19256 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
CD58P19256 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CD58P19256 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC19.63■□□□□ 0.73
CD58P19256 AC092597.1-201ENST00000487352 616 ntBASIC19.63■□□□□ 0.73
CD58P19256 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC19.63■□□□□ 0.73
CD58P19256 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
CD58P19256 AC079602.3-201ENST00000623931 403 ntBASIC19.63■□□□□ 0.73
CD58P19256 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CD58P19256 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC19.63■□□□□ 0.73
CD58P19256 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CD58P19256 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
CD58P19256 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC19.63■□□□□ 0.73
CD58P19256 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
CD58P19256 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CD58P19256 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
CD58P19256 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
CD58P19256 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CD58P19256 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CD58P19256 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
CD58P19256 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CD58P19256 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CD58P19256 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC19.62■□□□□ 0.73
CD58P19256 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CD58P19256 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC19.62■□□□□ 0.73
CD58P19256 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CD58P19256 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC19.62■□□□□ 0.73
CD58P19256 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
CD58P19256 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
CD58P19256 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC19.62■□□□□ 0.73
CD58P19256 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CD58P19256 AC135050.7-201ENST00000624508 2218 ntBASIC19.62■□□□□ 0.73
CD58P19256 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC19.62■□□□□ 0.73
CD58P19256 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC19.62■□□□□ 0.73
CD58P19256 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CD58P19256 COPE-203ENST00000351079 907 ntTSL 2 BASIC19.62■□□□□ 0.73
CD58P19256 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CD58P19256 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CD58P19256 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC19.62■□□□□ 0.73
CD58P19256 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC19.62■□□□□ 0.73
CD58P19256 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC19.62■□□□□ 0.73
CD58P19256 AC112907.2-201ENST00000448639 330 ntBASIC19.62■□□□□ 0.73
CD58P19256 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CD58P19256 REEP1-209ENST00000541910 969 ntTSL 2 BASIC19.62■□□□□ 0.73
CD58P19256 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC19.62■□□□□ 0.73
CD58P19256 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC19.62■□□□□ 0.73
CD58P19256 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC19.62■□□□□ 0.73
CD58P19256 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
CD58P19256 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC19.62■□□□□ 0.73
CD58P19256 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CD58P19256 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CD58P19256 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
CD58P19256 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
CD58P19256 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CD58P19256 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CD58P19256 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CD58P19256 BCL2-203ENST00000589955 5011 ntBASIC19.62■□□□□ 0.73
CD58P19256 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CD58P19256 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CD58P19256 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
CD58P19256 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
CD58P19256 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CD58P19256 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
CD58P19256 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC19.61■□□□□ 0.73
CD58P19256 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC19.61■□□□□ 0.73
CD58P19256 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC19.61■□□□□ 0.73
CD58P19256 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC19.61■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms