Protein–RNA interactions for Protein: P17405

SMPD1, Sphingomyelin phosphodiesterase, humanhuman

Predictions only

Length 629 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1P17405 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
SMPD1P17405 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
SMPD1P17405 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
SMPD1P17405 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC20.3■□□□□ 0.84
SMPD1P17405 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
SMPD1P17405 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
SMPD1P17405 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SMPD1P17405 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC20.3■□□□□ 0.84
SMPD1P17405 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SMPD1P17405 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
SMPD1P17405 FUOM-202ENST00000368551 628 ntTSL 3 BASIC20.3■□□□□ 0.84
SMPD1P17405 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC20.3■□□□□ 0.84
SMPD1P17405 KRT18P58-201ENST00000527480 1120 ntBASIC20.3■□□□□ 0.84
SMPD1P17405 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC20.3■□□□□ 0.84
SMPD1P17405 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC20.3■□□□□ 0.84
SMPD1P17405 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC20.3■□□□□ 0.84
SMPD1P17405 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC20.3■□□□□ 0.84
SMPD1P17405 PRKN-208ENST00000610470 531 ntTSL 2 BASIC20.3■□□□□ 0.84
SMPD1P17405 PRKN-209ENST00000612485 225 ntTSL 5 BASIC20.3■□□□□ 0.84
SMPD1P17405 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC20.3■□□□□ 0.84
SMPD1P17405 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC20.3■□□□□ 0.84
SMPD1P17405 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
SMPD1P17405 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
SMPD1P17405 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC20.3■□□□□ 0.84
SMPD1P17405 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SMPD1P17405 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC20.3■□□□□ 0.84
SMPD1P17405 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC20.3■□□□□ 0.84
SMPD1P17405 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SMPD1P17405 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SMPD1P17405 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SMPD1P17405 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC20.3■□□□□ 0.84
SMPD1P17405 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC20.29■□□□□ 0.84
SMPD1P17405 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SMPD1P17405 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SMPD1P17405 AP005117.1-201ENST00000584346 1413 ntBASIC20.29■□□□□ 0.84
SMPD1P17405 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
SMPD1P17405 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
SMPD1P17405 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC20.29■□□□□ 0.84
SMPD1P17405 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
SMPD1P17405 RPP21-221ENST00000428040 594 ntTSL 2 BASIC20.29■□□□□ 0.84
SMPD1P17405 KRT18P65-201ENST00000439811 1286 ntBASIC20.29■□□□□ 0.84
SMPD1P17405 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SMPD1P17405 RBSN-204ENST00000449050 903 ntTSL 2 BASIC20.29■□□□□ 0.84
SMPD1P17405 RPL13AP23-201ENST00000480739 586 ntBASIC20.29■□□□□ 0.84
SMPD1P17405 POLD2P1-201ENST00000511220 997 ntBASIC20.29■□□□□ 0.84
SMPD1P17405 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC20.29■□□□□ 0.84
SMPD1P17405 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC20.29■□□□□ 0.84
SMPD1P17405 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
SMPD1P17405 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC20.29■□□□□ 0.84
SMPD1P17405 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC20.29■□□□□ 0.84
SMPD1P17405 AC139530.3-201ENST00000620344 690 ntBASIC20.29■□□□□ 0.84
SMPD1P17405 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC20.29■□□□□ 0.84
SMPD1P17405 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC20.29■□□□□ 0.84
SMPD1P17405 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC20.29■□□□□ 0.84
SMPD1P17405 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SMPD1P17405 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
SMPD1P17405 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
SMPD1P17405 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC20.29■□□□□ 0.84
SMPD1P17405 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC20.29■□□□□ 0.84
SMPD1P17405 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
SMPD1P17405 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SMPD1P17405 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SMPD1P17405 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
SMPD1P17405 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
SMPD1P17405 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
SMPD1P17405 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
SMPD1P17405 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SMPD1P17405 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SMPD1P17405 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC20.28■□□□□ 0.84
SMPD1P17405 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC20.28■□□□□ 0.84
SMPD1P17405 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
SMPD1P17405 SNCG-201ENST00000348795 684 ntTSL 2 BASIC20.28■□□□□ 0.84
SMPD1P17405 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
SMPD1P17405 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC20.28■□□□□ 0.84
SMPD1P17405 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC20.28■□□□□ 0.84
SMPD1P17405 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC20.28■□□□□ 0.84
SMPD1P17405 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC20.28■□□□□ 0.84
SMPD1P17405 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC20.28■□□□□ 0.84
SMPD1P17405 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
SMPD1P17405 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC20.28■□□□□ 0.84
SMPD1P17405 AC116407.3-201ENST00000623905 1129 ntBASIC20.28■□□□□ 0.84
SMPD1P17405 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC20.28■□□□□ 0.84
SMPD1P17405 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
SMPD1P17405 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC20.28■□□□□ 0.84
SMPD1P17405 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
SMPD1P17405 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC20.28■□□□□ 0.84
SMPD1P17405 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC20.28■□□□□ 0.84
SMPD1P17405 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
SMPD1P17405 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC20.28■□□□□ 0.84
SMPD1P17405 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
SMPD1P17405 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
SMPD1P17405 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
SMPD1P17405 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC20.27■□□□□ 0.84
SMPD1P17405 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SMPD1P17405 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SMPD1P17405 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC20.27■□□□□ 0.84
SMPD1P17405 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC20.27■□□□□ 0.84
SMPD1P17405 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SMPD1P17405 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
SMPD1P17405 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 58.2 ms