Protein–RNA interactions for Protein: P12107

COL11A1, Collagen alpha-1(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1P12107 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC20.69■□□□□ 0.9
COL11A1P12107 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC20.69■□□□□ 0.9
COL11A1P12107 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC20.69■□□□□ 0.9
COL11A1P12107 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
COL11A1P12107 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
COL11A1P12107 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
COL11A1P12107 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
COL11A1P12107 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
COL11A1P12107 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
COL11A1P12107 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
COL11A1P12107 GMCL1P1-201ENST00000463439 1581 ntBASIC20.69■□□□□ 0.9
COL11A1P12107 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
COL11A1P12107 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC20.69■□□□□ 0.9
COL11A1P12107 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
COL11A1P12107 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC20.69■□□□□ 0.9
COL11A1P12107 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
COL11A1P12107 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC20.69■□□□□ 0.9
COL11A1P12107 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
COL11A1P12107 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC20.69■□□□□ 0.9
COL11A1P12107 AC007967.3-201ENST00000434308 558 ntBASIC20.69■□□□□ 0.9
COL11A1P12107 KRT18P58-201ENST00000527480 1120 ntBASIC20.69■□□□□ 0.9
COL11A1P12107 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
COL11A1P12107 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
COL11A1P12107 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
COL11A1P12107 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC20.68■□□□□ 0.9
COL11A1P12107 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
COL11A1P12107 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC20.68■□□□□ 0.9
COL11A1P12107 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC20.68■□□□□ 0.9
COL11A1P12107 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
COL11A1P12107 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC20.68■□□□□ 0.9
COL11A1P12107 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC20.68■□□□□ 0.9
COL11A1P12107 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC20.68■□□□□ 0.9
COL11A1P12107 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
COL11A1P12107 HIST2H3DP1-201ENST00000401004 416 ntBASIC20.68■□□□□ 0.9
COL11A1P12107 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
COL11A1P12107 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC20.68■□□□□ 0.9
COL11A1P12107 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC20.68■□□□□ 0.9
COL11A1P12107 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
COL11A1P12107 CROCCP3-202ENST00000420820 1947 ntBASIC20.68■□□□□ 0.9
COL11A1P12107 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
COL11A1P12107 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
COL11A1P12107 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
COL11A1P12107 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
COL11A1P12107 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
COL11A1P12107 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
COL11A1P12107 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC20.68■□□□□ 0.9
COL11A1P12107 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC20.68■□□□□ 0.9
COL11A1P12107 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
COL11A1P12107 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
COL11A1P12107 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
COL11A1P12107 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
COL11A1P12107 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
COL11A1P12107 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC20.67■□□□□ 0.9
COL11A1P12107 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC20.67■□□□□ 0.9
COL11A1P12107 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
COL11A1P12107 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
COL11A1P12107 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
COL11A1P12107 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC20.67■□□□□ 0.9
COL11A1P12107 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC20.67■□□□□ 0.9
COL11A1P12107 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC20.67■□□□□ 0.9
COL11A1P12107 AC021087.4-201ENST00000563761 564 ntBASIC20.67■□□□□ 0.9
COL11A1P12107 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC20.67■□□□□ 0.9
COL11A1P12107 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
COL11A1P12107 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC20.67■□□□□ 0.9
COL11A1P12107 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
COL11A1P12107 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC20.67■□□□□ 0.9
COL11A1P12107 SLC25A24-204ENST00000569674 2357 ntBASIC20.67■□□□□ 0.9
COL11A1P12107 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
COL11A1P12107 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
COL11A1P12107 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
COL11A1P12107 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
COL11A1P12107 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC20.67■□□□□ 0.9
COL11A1P12107 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC20.67■□□□□ 0.9
COL11A1P12107 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
COL11A1P12107 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC20.67■□□□□ 0.9
COL11A1P12107 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
COL11A1P12107 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
COL11A1P12107 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC20.67■□□□□ 0.9
COL11A1P12107 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC20.67■□□□□ 0.9
COL11A1P12107 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
COL11A1P12107 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC20.67■□□□□ 0.9
COL11A1P12107 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
COL11A1P12107 AC064862.7-201ENST00000604520 867 ntBASIC20.67■□□□□ 0.9
COL11A1P12107 AL139288.1-201ENST00000623748 933 ntBASIC20.67■□□□□ 0.9
COL11A1P12107 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
COL11A1P12107 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
COL11A1P12107 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC20.66■□□□□ 0.9
COL11A1P12107 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
COL11A1P12107 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
COL11A1P12107 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
COL11A1P12107 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
COL11A1P12107 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
COL11A1P12107 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
COL11A1P12107 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
COL11A1P12107 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC20.65■□□□□ 0.9
COL11A1P12107 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC20.65■□□□□ 0.9
COL11A1P12107 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
COL11A1P12107 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC20.65■□□□□ 0.9
COL11A1P12107 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
COL11A1P12107 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC20.65■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms