Protein–RNA interactions for Protein: P10586

PTPRF, Receptor-type tyrosine-protein phosphatase F, humanhuman

Predictions only

Length 1,907 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRFP10586 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PTPRFP10586 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC20.92■□□□□ 0.94
PTPRFP10586 UPF3AP3-201ENST00000420996 769 ntBASIC20.92■□□□□ 0.94
PTPRFP10586 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC20.92■□□□□ 0.94
PTPRFP10586 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC20.92■□□□□ 0.94
PTPRFP10586 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC20.92■□□□□ 0.94
PTPRFP10586 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PTPRFP10586 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC20.91■□□□□ 0.94
PTPRFP10586 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC20.91■□□□□ 0.94
PTPRFP10586 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
PTPRFP10586 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
PTPRFP10586 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC20.91■□□□□ 0.94
PTPRFP10586 FAM220CP-201ENST00000395253 831 ntBASIC20.91■□□□□ 0.94
PTPRFP10586 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
PTPRFP10586 AC004832.2-201ENST00000426397 482 ntBASIC20.91■□□□□ 0.94
PTPRFP10586 AC007967.3-201ENST00000434308 558 ntBASIC20.91■□□□□ 0.94
PTPRFP10586 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
PTPRFP10586 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC20.91■□□□□ 0.94
PTPRFP10586 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC20.91■□□□□ 0.94
PTPRFP10586 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
PTPRFP10586 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
PTPRFP10586 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
PTPRFP10586 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
PTPRFP10586 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
PTPRFP10586 AC010460.3-201ENST00000511359 1579 ntBASIC20.91■□□□□ 0.94
PTPRFP10586 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
PTPRFP10586 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
PTPRFP10586 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
PTPRFP10586 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
PTPRFP10586 AC005104.2-201ENST00000427818 678 ntBASIC20.9■□□□□ 0.94
PTPRFP10586 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC20.9■□□□□ 0.94
PTPRFP10586 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC20.9■□□□□ 0.94
PTPRFP10586 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC20.9■□□□□ 0.94
PTPRFP10586 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC20.9■□□□□ 0.94
PTPRFP10586 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC20.9■□□□□ 0.94
PTPRFP10586 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
PTPRFP10586 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
PTPRFP10586 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC20.9■□□□□ 0.94
PTPRFP10586 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
PTPRFP10586 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
PTPRFP10586 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
PTPRFP10586 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC20.9■□□□□ 0.94
PTPRFP10586 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
PTPRFP10586 AC092183.1-201ENST00000469884 875 ntBASIC20.9■□□□□ 0.94
PTPRFP10586 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC20.9■□□□□ 0.94
PTPRFP10586 HS6ST1P1-201ENST00000481504 1234 ntBASIC20.9■□□□□ 0.94
PTPRFP10586 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
PTPRFP10586 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
PTPRFP10586 CAND2-206ENST00000626378 333 ntTSL 5 BASIC20.9■□□□□ 0.94
PTPRFP10586 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
PTPRFP10586 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC20.9■□□□□ 0.94
PTPRFP10586 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
PTPRFP10586 HLA-J-201ENST00000462773 1622 ntBASIC20.9■□□□□ 0.94
PTPRFP10586 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
PTPRFP10586 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC20.9■□□□□ 0.94
PTPRFP10586 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.94
PTPRFP10586 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
PTPRFP10586 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC20.89■□□□□ 0.94
PTPRFP10586 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC20.89■□□□□ 0.94
PTPRFP10586 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
PTPRFP10586 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
PTPRFP10586 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC20.89■□□□□ 0.93
PTPRFP10586 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
PTPRFP10586 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
PTPRFP10586 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC20.89■□□□□ 0.93
PTPRFP10586 KRT18P27-201ENST00000427733 1299 ntBASIC20.89■□□□□ 0.93
PTPRFP10586 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC20.89■□□□□ 0.93
PTPRFP10586 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC20.89■□□□□ 0.93
PTPRFP10586 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
PTPRFP10586 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC20.89■□□□□ 0.93
PTPRFP10586 AC107918.4-202ENST00000641623 219 ntBASIC20.89■□□□□ 0.93
PTPRFP10586 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
PTPRFP10586 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
PTPRFP10586 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
PTPRFP10586 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
PTPRFP10586 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC20.89■□□□□ 0.93
PTPRFP10586 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
PTPRFP10586 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC20.89■□□□□ 0.93
PTPRFP10586 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
PTPRFP10586 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
PTPRFP10586 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
PTPRFP10586 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
PTPRFP10586 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
PTPRFP10586 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
PTPRFP10586 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC20.88■□□□□ 0.93
PTPRFP10586 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
PTPRFP10586 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
PTPRFP10586 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
PTPRFP10586 AP002414.3-201ENST00000589352 1468 ntBASIC20.88■□□□□ 0.93
PTPRFP10586 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
PTPRFP10586 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC20.88■□□□□ 0.93
PTPRFP10586 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
PTPRFP10586 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC20.88■□□□□ 0.93
PTPRFP10586 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
PTPRFP10586 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
PTPRFP10586 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
PTPRFP10586 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC20.88■□□□□ 0.93
PTPRFP10586 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
PTPRFP10586 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC20.88■□□□□ 0.93
PTPRFP10586 KIRREL3-AS3-201ENST00000404882 831 ntBASIC20.88■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 41.6 ms