Protein–RNA interactions for Protein: P10276

RARA, Retinoic acid receptor alpha, humanhuman

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RARAP10276 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.66
RARAP10276 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RARAP10276 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RARAP10276 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RARAP10276 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC19.2■□□□□ 0.66
RARAP10276 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RARAP10276 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC19.2■□□□□ 0.66
RARAP10276 KRT8P7-201ENST00000533003 1432 ntBASIC19.2■□□□□ 0.66
RARAP10276 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RARAP10276 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
RARAP10276 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RARAP10276 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RARAP10276 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
RARAP10276 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC19.2■□□□□ 0.66
RARAP10276 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC19.2■□□□□ 0.66
RARAP10276 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC19.2■□□□□ 0.66
RARAP10276 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC19.2■□□□□ 0.66
RARAP10276 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
RARAP10276 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC19.2■□□□□ 0.66
RARAP10276 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RARAP10276 FAM87A-204ENST00000613235 858 ntBASIC19.2■□□□□ 0.66
RARAP10276 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RARAP10276 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
RARAP10276 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
RARAP10276 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
RARAP10276 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
RARAP10276 AL163051.1-201ENST00000569214 1512 ntBASIC19.2■□□□□ 0.66
RARAP10276 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
RARAP10276 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
RARAP10276 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RARAP10276 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC19.2■□□□□ 0.66
RARAP10276 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
RARAP10276 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
RARAP10276 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC19.19■□□□□ 0.66
RARAP10276 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
RARAP10276 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
RARAP10276 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
RARAP10276 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC19.19■□□□□ 0.66
RARAP10276 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC19.19■□□□□ 0.66
RARAP10276 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC19.19■□□□□ 0.66
RARAP10276 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
RARAP10276 SLC25A6P5-201ENST00000435663 894 ntBASIC19.19■□□□□ 0.66
RARAP10276 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
RARAP10276 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC19.19■□□□□ 0.66
RARAP10276 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC19.19■□□□□ 0.66
RARAP10276 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC19.19■□□□□ 0.66
RARAP10276 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
RARAP10276 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RARAP10276 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RARAP10276 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
RARAP10276 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RARAP10276 LINC00896-202ENST00000609602 2128 ntBASIC19.19■□□□□ 0.66
RARAP10276 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC19.19■□□□□ 0.66
RARAP10276 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC19.19■□□□□ 0.66
RARAP10276 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
RARAP10276 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RARAP10276 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RARAP10276 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC19.19■□□□□ 0.66
RARAP10276 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
RARAP10276 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RARAP10276 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
RARAP10276 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RARAP10276 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC19.18■□□□□ 0.66
RARAP10276 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
RARAP10276 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
RARAP10276 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
RARAP10276 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RARAP10276 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
RARAP10276 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RARAP10276 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
RARAP10276 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC19.18■□□□□ 0.66
RARAP10276 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC19.18■□□□□ 0.66
RARAP10276 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC19.18■□□□□ 0.66
RARAP10276 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RARAP10276 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RARAP10276 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC19.18■□□□□ 0.66
RARAP10276 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC19.18■□□□□ 0.66
RARAP10276 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
RARAP10276 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
RARAP10276 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
RARAP10276 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
RARAP10276 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC19.18■□□□□ 0.66
RARAP10276 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
RARAP10276 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC19.18■□□□□ 0.66
RARAP10276 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RARAP10276 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
RARAP10276 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC19.17■□□□□ 0.66
RARAP10276 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
RARAP10276 SDHAP2-201ENST00000455183 2001 ntBASIC19.17■□□□□ 0.66
RARAP10276 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC19.17■□□□□ 0.66
RARAP10276 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RARAP10276 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RARAP10276 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC19.17■□□□□ 0.66
RARAP10276 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RARAP10276 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RARAP10276 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC19.17■□□□□ 0.66
RARAP10276 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RARAP10276 SNCG-201ENST00000348795 684 ntTSL 2 BASIC19.17■□□□□ 0.66
RARAP10276 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RARAP10276 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC19.17■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 39 ms