Protein–RNA interactions for Protein: P09603

CSF1, Macrophage colony-stimulating factor 1, humanhuman

Predictions only

Length 554 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSF1P09603 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CSF1P09603 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC15.83■□□□□ 0.12
CSF1P09603 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CSF1P09603 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CSF1P09603 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CSF1P09603 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CSF1P09603 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
CSF1P09603 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
CSF1P09603 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
CSF1P09603 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC15.82■□□□□ 0.12
CSF1P09603 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CSF1P09603 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
CSF1P09603 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC15.82■□□□□ 0.12
CSF1P09603 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CSF1P09603 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CSF1P09603 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
CSF1P09603 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CSF1P09603 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CSF1P09603 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CSF1P09603 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CSF1P09603 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CSF1P09603 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC15.82■□□□□ 0.12
CSF1P09603 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
CSF1P09603 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
CSF1P09603 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
CSF1P09603 KRT8P45-201ENST00000414328 1447 ntBASIC15.82■□□□□ 0.12
CSF1P09603 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC15.82■□□□□ 0.12
CSF1P09603 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
CSF1P09603 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
CSF1P09603 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
CSF1P09603 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CSF1P09603 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CSF1P09603 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC15.82■□□□□ 0.12
CSF1P09603 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CSF1P09603 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
CSF1P09603 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CSF1P09603 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
CSF1P09603 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CSF1P09603 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
CSF1P09603 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
CSF1P09603 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC15.81■□□□□ 0.12
CSF1P09603 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CSF1P09603 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CSF1P09603 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CSF1P09603 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CSF1P09603 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
CSF1P09603 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC15.81■□□□□ 0.12
CSF1P09603 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CSF1P09603 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
CSF1P09603 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
CSF1P09603 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
CSF1P09603 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC15.81■□□□□ 0.12
CSF1P09603 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CSF1P09603 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CSF1P09603 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
CSF1P09603 AC239809.2-201ENST00000415381 517 ntBASIC15.81■□□□□ 0.12
CSF1P09603 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CSF1P09603 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC15.81■□□□□ 0.12
CSF1P09603 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC15.81■□□□□ 0.12
CSF1P09603 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC15.81■□□□□ 0.12
CSF1P09603 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
CSF1P09603 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
CSF1P09603 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CSF1P09603 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC15.81■□□□□ 0.12
CSF1P09603 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC15.81■□□□□ 0.12
CSF1P09603 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC15.81■□□□□ 0.12
CSF1P09603 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC15.81■□□□□ 0.12
CSF1P09603 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC15.81■□□□□ 0.12
CSF1P09603 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
CSF1P09603 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC15.81■□□□□ 0.12
CSF1P09603 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC15.81■□□□□ 0.12
CSF1P09603 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CSF1P09603 OR6D1P-203ENST00000641209 4860 ntBASIC15.81■□□□□ 0.12
CSF1P09603 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CSF1P09603 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC15.81■□□□□ 0.12
CSF1P09603 AC106820.2-201ENST00000563775 3264 ntBASIC15.81■□□□□ 0.12
CSF1P09603 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CSF1P09603 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CSF1P09603 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC15.81■□□□□ 0.12
CSF1P09603 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC15.81■□□□□ 0.12
CSF1P09603 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CSF1P09603 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
CSF1P09603 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CSF1P09603 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CSF1P09603 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CSF1P09603 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CSF1P09603 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
CSF1P09603 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CSF1P09603 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC15.8■□□□□ 0.12
CSF1P09603 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC15.8■□□□□ 0.12
CSF1P09603 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CSF1P09603 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CSF1P09603 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CSF1P09603 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
CSF1P09603 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC15.8■□□□□ 0.12
CSF1P09603 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC15.8■□□□□ 0.12
CSF1P09603 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CSF1P09603 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
CSF1P09603 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CSF1P09603 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 45.1 ms