Protein–RNA interactions for Protein: P09493

TPM1, Tropomyosin alpha-1 chain, humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1P09493 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC20.17■□□□□ 0.82
TPM1P09493 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC20.17■□□□□ 0.82
TPM1P09493 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
TPM1P09493 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC20.17■□□□□ 0.82
TPM1P09493 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC20.17■□□□□ 0.82
TPM1P09493 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
TPM1P09493 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
TPM1P09493 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
TPM1P09493 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC20.17■□□□□ 0.82
TPM1P09493 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
TPM1P09493 ENSA-205ENST00000361532 792 ntTSL 2 BASIC20.17■□□□□ 0.82
TPM1P09493 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC20.17■□□□□ 0.82
TPM1P09493 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
TPM1P09493 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC20.17■□□□□ 0.82
TPM1P09493 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC20.17■□□□□ 0.82
TPM1P09493 GAS7-202ENST00000396115 929 ntTSL 5 BASIC20.17■□□□□ 0.82
TPM1P09493 AC004951.3-201ENST00000418645 1148 ntBASIC20.17■□□□□ 0.82
TPM1P09493 AC004980.1-204ENST00000429707 299 ntBASIC20.17■□□□□ 0.82
TPM1P09493 KRT18P41-201ENST00000518924 1277 ntBASIC20.17■□□□□ 0.82
TPM1P09493 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC20.17■□□□□ 0.82
TPM1P09493 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC20.17■□□□□ 0.82
TPM1P09493 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC20.17■□□□□ 0.82
TPM1P09493 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
TPM1P09493 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC20.17■□□□□ 0.82
TPM1P09493 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
TPM1P09493 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
TPM1P09493 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
TPM1P09493 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
TPM1P09493 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC20.16■□□□□ 0.82
TPM1P09493 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
TPM1P09493 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC20.16■□□□□ 0.82
TPM1P09493 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
TPM1P09493 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
TPM1P09493 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC20.16■□□□□ 0.82
TPM1P09493 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
TPM1P09493 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
TPM1P09493 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
TPM1P09493 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
TPM1P09493 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
TPM1P09493 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
TPM1P09493 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
TPM1P09493 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
TPM1P09493 AP000593.1-201ENST00000393668 712 ntBASIC20.16■□□□□ 0.82
TPM1P09493 NIFKP9-201ENST00000419265 221 ntBASIC20.16■□□□□ 0.82
TPM1P09493 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
TPM1P09493 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC20.16■□□□□ 0.82
TPM1P09493 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
TPM1P09493 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
TPM1P09493 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC20.16■□□□□ 0.82
TPM1P09493 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC20.16■□□□□ 0.82
TPM1P09493 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
TPM1P09493 CEP83-AS1-201ENST00000623122 2482 ntBASIC20.16■□□□□ 0.82
TPM1P09493 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC20.16■□□□□ 0.82
TPM1P09493 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC20.16■□□□□ 0.82
TPM1P09493 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
TPM1P09493 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
TPM1P09493 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
TPM1P09493 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC20.15■□□□□ 0.82
TPM1P09493 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
TPM1P09493 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
TPM1P09493 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
TPM1P09493 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
TPM1P09493 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
TPM1P09493 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC20.15■□□□□ 0.82
TPM1P09493 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
TPM1P09493 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
TPM1P09493 AC091390.4-202ENST00000476426 537 ntBASIC20.15■□□□□ 0.82
TPM1P09493 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC20.15■□□□□ 0.82
TPM1P09493 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC20.15■□□□□ 0.82
TPM1P09493 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
TPM1P09493 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
TPM1P09493 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
TPM1P09493 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC20.15■□□□□ 0.82
TPM1P09493 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC20.15■□□□□ 0.82
TPM1P09493 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC20.15■□□□□ 0.82
TPM1P09493 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
TPM1P09493 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC20.15■□□□□ 0.82
TPM1P09493 FER1L4-210ENST00000615531 5998 ntBASIC20.15■□□□□ 0.82
TPM1P09493 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
TPM1P09493 GNE-204ENST00000539208 2190 ntTSL 2 BASIC20.15■□□□□ 0.82
TPM1P09493 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
TPM1P09493 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
TPM1P09493 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
TPM1P09493 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
TPM1P09493 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
TPM1P09493 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.82
TPM1P09493 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.82
TPM1P09493 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC20.14■□□□□ 0.82
TPM1P09493 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC20.14■□□□□ 0.82
TPM1P09493 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC20.14■□□□□ 0.81
TPM1P09493 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
TPM1P09493 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC20.14■□□□□ 0.81
TPM1P09493 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC20.14■□□□□ 0.81
TPM1P09493 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
TPM1P09493 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC20.14■□□□□ 0.81
TPM1P09493 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
TPM1P09493 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
TPM1P09493 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
TPM1P09493 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
TPM1P09493 AP002982.1-201ENST00000492365 877 ntBASIC20.14■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 41.2 ms