Protein–RNA interactions for Protein: P08123

COL1A2, Collagen alpha-2(I) chain, humanhuman

Predictions only

Length 1,366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A2P08123 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC19.99■□□□□ 0.79
COL1A2P08123 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
COL1A2P08123 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
COL1A2P08123 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC19.99■□□□□ 0.79
COL1A2P08123 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
COL1A2P08123 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
COL1A2P08123 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
COL1A2P08123 AC125634.1-201ENST00000438758 1403 ntBASIC19.99■□□□□ 0.79
COL1A2P08123 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
COL1A2P08123 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
COL1A2P08123 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
COL1A2P08123 AC112698.1-201ENST00000510299 916 ntBASIC19.98■□□□□ 0.79
COL1A2P08123 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC19.98■□□□□ 0.79
COL1A2P08123 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC19.98■□□□□ 0.79
COL1A2P08123 AP002469.2-201ENST00000531724 424 ntBASIC19.98■□□□□ 0.79
COL1A2P08123 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC19.98■□□□□ 0.79
COL1A2P08123 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
COL1A2P08123 TP73-AS1-210ENST00000637775 1455 ntBASIC19.98■□□□□ 0.79
COL1A2P08123 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
COL1A2P08123 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
COL1A2P08123 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC19.98■□□□□ 0.79
COL1A2P08123 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC19.98■□□□□ 0.79
COL1A2P08123 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
COL1A2P08123 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
COL1A2P08123 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC19.98■□□□□ 0.79
COL1A2P08123 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
COL1A2P08123 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
COL1A2P08123 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
COL1A2P08123 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
COL1A2P08123 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC19.97■□□□□ 0.79
COL1A2P08123 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
COL1A2P08123 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC19.97■□□□□ 0.79
COL1A2P08123 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
COL1A2P08123 AC106795.1-205ENST00000512851 1056 ntBASIC19.97■□□□□ 0.79
COL1A2P08123 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC19.97■□□□□ 0.79
COL1A2P08123 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
COL1A2P08123 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
COL1A2P08123 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
COL1A2P08123 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
COL1A2P08123 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
COL1A2P08123 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC19.97■□□□□ 0.79
COL1A2P08123 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
COL1A2P08123 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
COL1A2P08123 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
COL1A2P08123 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC19.97■□□□□ 0.79
COL1A2P08123 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
COL1A2P08123 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC19.97■□□□□ 0.79
COL1A2P08123 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
COL1A2P08123 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
COL1A2P08123 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
COL1A2P08123 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
COL1A2P08123 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
COL1A2P08123 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC19.96■□□□□ 0.79
COL1A2P08123 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC19.96■□□□□ 0.79
COL1A2P08123 THAP5-204ENST00000438865 868 ntTSL 2 BASIC19.96■□□□□ 0.79
COL1A2P08123 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
COL1A2P08123 AC009078.2-202ENST00000463353 338 ntBASIC19.96■□□□□ 0.79
COL1A2P08123 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC19.96■□□□□ 0.79
COL1A2P08123 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
COL1A2P08123 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
COL1A2P08123 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC19.96■□□□□ 0.79
COL1A2P08123 VPS51-217ENST00000639871 243 ntTSL 5 BASIC19.96■□□□□ 0.79
COL1A2P08123 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
COL1A2P08123 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
COL1A2P08123 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC19.96■□□□□ 0.79
COL1A2P08123 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
COL1A2P08123 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
COL1A2P08123 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC19.96■□□□□ 0.79
COL1A2P08123 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC19.96■□□□□ 0.79
COL1A2P08123 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
COL1A2P08123 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC19.96■□□□□ 0.79
COL1A2P08123 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC19.96■□□□□ 0.79
COL1A2P08123 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC19.96■□□□□ 0.79
COL1A2P08123 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
COL1A2P08123 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC19.96■□□□□ 0.79
COL1A2P08123 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.79
COL1A2P08123 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC19.95■□□□□ 0.79
COL1A2P08123 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC19.95■□□□□ 0.79
COL1A2P08123 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC19.95■□□□□ 0.79
COL1A2P08123 AF238378.1-201ENST00000526806 358 ntBASIC19.95■□□□□ 0.79
COL1A2P08123 AC011467.2-201ENST00000598425 242 ntBASIC19.95■□□□□ 0.79
COL1A2P08123 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
COL1A2P08123 AC132938.6-201ENST00000623828 1655 ntBASIC19.95■□□□□ 0.78
COL1A2P08123 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC19.95■□□□□ 0.78
COL1A2P08123 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC19.95■□□□□ 0.78
COL1A2P08123 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
COL1A2P08123 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC19.95■□□□□ 0.78
COL1A2P08123 AC093010.1-201ENST00000473625 1624 ntBASIC19.95■□□□□ 0.78
COL1A2P08123 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
COL1A2P08123 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC19.95■□□□□ 0.78
COL1A2P08123 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC19.95■□□□□ 0.78
COL1A2P08123 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
COL1A2P08123 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
COL1A2P08123 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
COL1A2P08123 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
COL1A2P08123 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
COL1A2P08123 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
COL1A2P08123 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC19.95■□□□□ 0.78
COL1A2P08123 RCN1P2-201ENST00000398357 915 ntBASIC19.95■□□□□ 0.78
COL1A2P08123 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 39 ms