Protein–RNA interactions for Protein: P07858

CTSB, Cathepsin B, humanhuman

Predictions only

Length 339 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSBP07858 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
CTSBP07858 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC17.29■□□□□ 0.36
CTSBP07858 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC17.29■□□□□ 0.36
CTSBP07858 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
CTSBP07858 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC17.29■□□□□ 0.36
CTSBP07858 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CTSBP07858 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CTSBP07858 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC17.28■□□□□ 0.36
CTSBP07858 AC233702.3-201ENST00000578656 1387 ntBASIC17.28■□□□□ 0.36
CTSBP07858 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CTSBP07858 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC17.28■□□□□ 0.36
CTSBP07858 GMCL1P1-201ENST00000463439 1581 ntBASIC17.28■□□□□ 0.36
CTSBP07858 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC17.28■□□□□ 0.36
CTSBP07858 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
CTSBP07858 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CTSBP07858 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
CTSBP07858 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
CTSBP07858 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CTSBP07858 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CTSBP07858 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
CTSBP07858 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CTSBP07858 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CTSBP07858 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC17.28■□□□□ 0.36
CTSBP07858 PNN-202ENST00000553331 656 ntTSL 3 BASIC17.28■□□□□ 0.36
CTSBP07858 PRR29-207ENST00000580752 458 ntTSL 3 BASIC17.28■□□□□ 0.36
CTSBP07858 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
CTSBP07858 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC17.28■□□□□ 0.36
CTSBP07858 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC17.28■□□□□ 0.36
CTSBP07858 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC17.28■□□□□ 0.36
CTSBP07858 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CTSBP07858 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CTSBP07858 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CTSBP07858 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CTSBP07858 AL138781.2-201ENST00000617896 1843 ntBASIC17.28■□□□□ 0.36
CTSBP07858 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC17.28■□□□□ 0.36
CTSBP07858 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
CTSBP07858 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CTSBP07858 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
CTSBP07858 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CTSBP07858 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
CTSBP07858 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CTSBP07858 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
CTSBP07858 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CTSBP07858 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CTSBP07858 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CTSBP07858 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.36
CTSBP07858 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CTSBP07858 AC009113.1-201ENST00000570267 2443 ntBASIC17.27■□□□□ 0.36
CTSBP07858 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CTSBP07858 AC132938.6-201ENST00000623828 1655 ntBASIC17.27■□□□□ 0.36
CTSBP07858 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC17.27■□□□□ 0.36
CTSBP07858 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CTSBP07858 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CTSBP07858 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC17.27■□□□□ 0.36
CTSBP07858 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CTSBP07858 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CTSBP07858 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CTSBP07858 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC17.27■□□□□ 0.36
CTSBP07858 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC17.27■□□□□ 0.36
CTSBP07858 AC113404.2-201ENST00000507884 177 ntBASIC17.27■□□□□ 0.36
CTSBP07858 UNC93B7-201ENST00000509439 705 ntBASIC17.27■□□□□ 0.36
CTSBP07858 GUSBP12-201ENST00000513727 720 ntBASIC17.27■□□□□ 0.36
CTSBP07858 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC17.27■□□□□ 0.36
CTSBP07858 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC17.27■□□□□ 0.36
CTSBP07858 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC17.27■□□□□ 0.36
CTSBP07858 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC17.27■□□□□ 0.36
CTSBP07858 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CTSBP07858 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
CTSBP07858 PHGDH-209ENST00000641074 1780 ntBASIC17.27■□□□□ 0.35
CTSBP07858 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.35
CTSBP07858 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
CTSBP07858 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
CTSBP07858 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
CTSBP07858 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
CTSBP07858 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
CTSBP07858 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC17.26■□□□□ 0.35
CTSBP07858 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CTSBP07858 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CTSBP07858 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC17.26■□□□□ 0.35
CTSBP07858 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
CTSBP07858 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC17.26■□□□□ 0.35
CTSBP07858 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CTSBP07858 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CTSBP07858 SNCG-201ENST00000348795 684 ntTSL 2 BASIC17.26■□□□□ 0.35
CTSBP07858 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC17.26■□□□□ 0.35
CTSBP07858 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC17.26■□□□□ 0.35
CTSBP07858 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC17.26■□□□□ 0.35
CTSBP07858 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC17.26■□□□□ 0.35
CTSBP07858 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC17.26■□□□□ 0.35
CTSBP07858 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CTSBP07858 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC17.26■□□□□ 0.35
CTSBP07858 AL732292.2-201ENST00000609649 430 ntBASIC17.26■□□□□ 0.35
CTSBP07858 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
CTSBP07858 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CTSBP07858 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CTSBP07858 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CTSBP07858 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC17.26■□□□□ 0.35
CTSBP07858 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CTSBP07858 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC17.26■□□□□ 0.35
CTSBP07858 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms