Protein–RNA interactions for Protein: P06753

TPM3, Tropomyosin alpha-3 chain, humanhuman

Predictions only

Length 285 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P06753 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC20.53■□□□□ 0.88
TPM3P06753 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TPM3P06753 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
TPM3P06753 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TPM3P06753 AL023806.1-201ENST00000603994 1649 ntBASIC20.53■□□□□ 0.88
TPM3P06753 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
TPM3P06753 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
TPM3P06753 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
TPM3P06753 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
TPM3P06753 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
TPM3P06753 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
TPM3P06753 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
TPM3P06753 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC20.52■□□□□ 0.88
TPM3P06753 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
TPM3P06753 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC20.52■□□□□ 0.88
TPM3P06753 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
TPM3P06753 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC20.52■□□□□ 0.88
TPM3P06753 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
TPM3P06753 POU5F1P3-201ENST00000428824 1078 ntBASIC20.52■□□□□ 0.88
TPM3P06753 THEM4-205ENST00000489410 643 ntTSL 2 BASIC20.52■□□□□ 0.88
TPM3P06753 PPP1R14BP3-201ENST00000509033 445 ntBASIC20.52■□□□□ 0.88
TPM3P06753 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC20.52■□□□□ 0.88
TPM3P06753 MNT-208ENST00000575394 606 ntTSL 4 BASIC20.52■□□□□ 0.88
TPM3P06753 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC20.52■□□□□ 0.88
TPM3P06753 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC20.52■□□□□ 0.88
TPM3P06753 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
TPM3P06753 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC20.52■□□□□ 0.88
TPM3P06753 AC008556.1-201ENST00000610908 2040 ntBASIC20.52■□□□□ 0.88
TPM3P06753 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC20.52■□□□□ 0.88
TPM3P06753 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
TPM3P06753 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC20.52■□□□□ 0.88
TPM3P06753 AL357033.4-201ENST00000617703 1807 ntBASIC20.52■□□□□ 0.88
TPM3P06753 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
TPM3P06753 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.87
TPM3P06753 HARS-201ENST00000307633 1780 ntTSL 2 BASIC20.51■□□□□ 0.87
TPM3P06753 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
TPM3P06753 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
TPM3P06753 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
TPM3P06753 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
TPM3P06753 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC20.51■□□□□ 0.87
TPM3P06753 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
TPM3P06753 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC20.51■□□□□ 0.87
TPM3P06753 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
TPM3P06753 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC20.51■□□□□ 0.87
TPM3P06753 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
TPM3P06753 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC20.51■□□□□ 0.87
TPM3P06753 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
TPM3P06753 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
TPM3P06753 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC20.51■□□□□ 0.87
TPM3P06753 AL121761.2-201ENST00000598007 1648 ntBASIC20.51■□□□□ 0.87
TPM3P06753 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC20.51■□□□□ 0.87
TPM3P06753 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC20.51■□□□□ 0.87
TPM3P06753 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC20.51■□□□□ 0.87
TPM3P06753 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
TPM3P06753 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
TPM3P06753 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC20.51■□□□□ 0.87
TPM3P06753 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
TPM3P06753 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC20.51■□□□□ 0.87
TPM3P06753 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
TPM3P06753 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
TPM3P06753 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC20.5■□□□□ 0.87
TPM3P06753 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC20.5■□□□□ 0.87
TPM3P06753 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
TPM3P06753 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
TPM3P06753 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
TPM3P06753 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
TPM3P06753 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
TPM3P06753 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
TPM3P06753 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
TPM3P06753 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
TPM3P06753 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
TPM3P06753 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
TPM3P06753 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC20.5■□□□□ 0.87
TPM3P06753 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC20.5■□□□□ 0.87
TPM3P06753 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
TPM3P06753 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC20.5■□□□□ 0.87
TPM3P06753 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC20.5■□□□□ 0.87
TPM3P06753 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
TPM3P06753 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
TPM3P06753 INO80E-214ENST00000620599 515 ntTSL 2 BASIC20.5■□□□□ 0.87
TPM3P06753 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
TPM3P06753 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
TPM3P06753 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
TPM3P06753 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
TPM3P06753 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
TPM3P06753 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
TPM3P06753 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC20.5■□□□□ 0.87
TPM3P06753 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
TPM3P06753 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC20.5■□□□□ 0.87
TPM3P06753 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC20.5■□□□□ 0.87
TPM3P06753 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
TPM3P06753 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC20.5■□□□□ 0.87
TPM3P06753 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC20.49■□□□□ 0.87
TPM3P06753 NFIC-211ENST00000641145 8399 ntBASIC20.49■□□□□ 0.87
TPM3P06753 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC20.49■□□□□ 0.87
TPM3P06753 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
TPM3P06753 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
TPM3P06753 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
TPM3P06753 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
TPM3P06753 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC20.49■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms