Protein–RNA interactions for Protein: P05114

HMGN1, Non-histone chromosomal protein HMG-14, humanhuman

Predictions only

Length 100 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P05114 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
HMGN1P05114 ESRRAP1-201ENST00000400596 1257 ntBASIC16.59■□□□□ 0.25
HMGN1P05114 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
HMGN1P05114 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC16.59■□□□□ 0.25
HMGN1P05114 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC16.59■□□□□ 0.25
HMGN1P05114 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC16.59■□□□□ 0.25
HMGN1P05114 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC16.59■□□□□ 0.25
HMGN1P05114 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC16.59■□□□□ 0.25
HMGN1P05114 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
HMGN1P05114 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
HMGN1P05114 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
HMGN1P05114 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC16.59■□□□□ 0.25
HMGN1P05114 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
HMGN1P05114 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC16.59■□□□□ 0.25
HMGN1P05114 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC16.59■□□□□ 0.25
HMGN1P05114 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC16.59■□□□□ 0.25
HMGN1P05114 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC16.59■□□□□ 0.25
HMGN1P05114 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
HMGN1P05114 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
HMGN1P05114 SIRPAP1-201ENST00000448467 1770 ntBASIC16.59■□□□□ 0.25
HMGN1P05114 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC16.59■□□□□ 0.25
HMGN1P05114 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
HMGN1P05114 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
HMGN1P05114 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
HMGN1P05114 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.25
HMGN1P05114 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.25
HMGN1P05114 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
HMGN1P05114 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC16.58■□□□□ 0.25
HMGN1P05114 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
HMGN1P05114 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC16.58■□□□□ 0.24
HMGN1P05114 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
HMGN1P05114 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
HMGN1P05114 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.24
HMGN1P05114 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC16.58■□□□□ 0.24
HMGN1P05114 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
HMGN1P05114 AL023284.2-201ENST00000405850 579 ntBASIC16.58■□□□□ 0.24
HMGN1P05114 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC16.58■□□□□ 0.24
HMGN1P05114 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
HMGN1P05114 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC16.58■□□□□ 0.24
HMGN1P05114 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
HMGN1P05114 AC073195.1-201ENST00000607241 877 ntBASIC16.58■□□□□ 0.24
HMGN1P05114 MIR6786-201ENST00000616843 113 ntBASIC16.58■□□□□ 0.24
HMGN1P05114 AC008622.2-201ENST00000617006 1229 ntBASIC16.58■□□□□ 0.24
HMGN1P05114 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC16.58■□□□□ 0.24
HMGN1P05114 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC16.58■□□□□ 0.24
HMGN1P05114 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.24
HMGN1P05114 PHGDH-209ENST00000641074 1780 ntBASIC16.58■□□□□ 0.24
HMGN1P05114 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC16.58■□□□□ 0.24
HMGN1P05114 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
HMGN1P05114 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC16.58■□□□□ 0.24
HMGN1P05114 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
HMGN1P05114 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
HMGN1P05114 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
HMGN1P05114 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
HMGN1P05114 AL139384.1-201ENST00000612143 3047 ntBASIC16.58■□□□□ 0.24
HMGN1P05114 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
HMGN1P05114 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
HMGN1P05114 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC16.57■□□□□ 0.24
HMGN1P05114 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
HMGN1P05114 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC16.57■□□□□ 0.24
HMGN1P05114 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC16.57■□□□□ 0.24
HMGN1P05114 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
HMGN1P05114 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
HMGN1P05114 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
HMGN1P05114 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
HMGN1P05114 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
HMGN1P05114 HLA-DQB1-201ENST00000374943 1656 ntBASIC16.57■□□□□ 0.24
HMGN1P05114 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC16.57■□□□□ 0.24
HMGN1P05114 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC16.57■□□□□ 0.24
HMGN1P05114 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC16.57■□□□□ 0.24
HMGN1P05114 KRT8P50-201ENST00000562022 1438 ntBASIC16.57■□□□□ 0.24
HMGN1P05114 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC16.57■□□□□ 0.24
HMGN1P05114 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
HMGN1P05114 AC011506.1-201ENST00000474329 610 ntBASIC16.57■□□□□ 0.24
HMGN1P05114 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC16.57■□□□□ 0.24
HMGN1P05114 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
HMGN1P05114 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
HMGN1P05114 AP000692.2-201ENST00000608391 879 ntBASIC16.57■□□□□ 0.24
HMGN1P05114 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
HMGN1P05114 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
HMGN1P05114 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
HMGN1P05114 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC16.57■□□□□ 0.24
HMGN1P05114 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
HMGN1P05114 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
HMGN1P05114 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
HMGN1P05114 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
HMGN1P05114 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
HMGN1P05114 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC16.56■□□□□ 0.24
HMGN1P05114 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
HMGN1P05114 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC16.56■□□□□ 0.24
HMGN1P05114 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
HMGN1P05114 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
HMGN1P05114 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
HMGN1P05114 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC16.56■□□□□ 0.24
HMGN1P05114 FSCN1P1-201ENST00000568912 1481 ntBASIC16.56■□□□□ 0.24
HMGN1P05114 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC16.56■□□□□ 0.24
HMGN1P05114 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
HMGN1P05114 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
HMGN1P05114 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC16.56■□□□□ 0.24
HMGN1P05114 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms