Protein–RNA interactions for Protein: P05060

CHGB, Secretogranin-1, humanhuman

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHGBP05060 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
CHGBP05060 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
CHGBP05060 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC21.95■■□□□ 1.1
CHGBP05060 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
CHGBP05060 TSPY22P-201ENST00000427496 604 ntBASIC21.95■■□□□ 1.1
CHGBP05060 KRT18P48-201ENST00000434763 852 ntBASIC21.95■■□□□ 1.1
CHGBP05060 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC21.95■■□□□ 1.1
CHGBP05060 NPAP1P7-201ENST00000613027 823 ntBASIC21.95■■□□□ 1.1
CHGBP05060 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC21.95■■□□□ 1.1
CHGBP05060 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC21.95■■□□□ 1.1
CHGBP05060 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
CHGBP05060 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC21.95■■□□□ 1.1
CHGBP05060 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC21.95■■□□□ 1.1
CHGBP05060 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
CHGBP05060 LINC00167-201ENST00000530583 1419 ntBASIC21.95■■□□□ 1.1
CHGBP05060 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC21.95■■□□□ 1.1
CHGBP05060 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
CHGBP05060 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
CHGBP05060 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC21.94■■□□□ 1.1
CHGBP05060 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC21.94■■□□□ 1.1
CHGBP05060 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
CHGBP05060 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
CHGBP05060 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
CHGBP05060 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC21.94■■□□□ 1.1
CHGBP05060 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC21.94■■□□□ 1.1
CHGBP05060 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
CHGBP05060 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
CHGBP05060 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
CHGBP05060 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC21.94■■□□□ 1.1
CHGBP05060 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
CHGBP05060 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC21.94■■□□□ 1.1
CHGBP05060 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC21.94■■□□□ 1.1
CHGBP05060 MIR3180-1-201ENST00000580374 94 ntBASIC21.94■■□□□ 1.1
CHGBP05060 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC21.94■■□□□ 1.1
CHGBP05060 MIR3180-3-201ENST00000584616 94 ntBASIC21.94■■□□□ 1.1
CHGBP05060 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
CHGBP05060 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
CHGBP05060 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC21.94■■□□□ 1.1
CHGBP05060 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC21.94■■□□□ 1.1
CHGBP05060 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
CHGBP05060 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC21.94■■□□□ 1.1
CHGBP05060 EFTUD1P1-204ENST00000560401 1798 ntBASIC21.94■■□□□ 1.1
CHGBP05060 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC21.94■■□□□ 1.1
CHGBP05060 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
CHGBP05060 AL096828.2-201ENST00000567259 1965 ntBASIC21.94■■□□□ 1.1
CHGBP05060 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
CHGBP05060 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC21.93■■□□□ 1.1
CHGBP05060 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC21.93■■□□□ 1.1
CHGBP05060 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
CHGBP05060 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
CHGBP05060 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
CHGBP05060 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC21.93■■□□□ 1.1
CHGBP05060 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
CHGBP05060 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC21.93■■□□□ 1.1
CHGBP05060 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC21.93■■□□□ 1.1
CHGBP05060 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC21.93■■□□□ 1.1
CHGBP05060 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
CHGBP05060 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
CHGBP05060 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC21.93■■□□□ 1.1
CHGBP05060 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
CHGBP05060 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC21.93■■□□□ 1.1
CHGBP05060 BICD1-207ENST00000551848 1962 ntBASIC21.93■■□□□ 1.1
CHGBP05060 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
CHGBP05060 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC21.93■■□□□ 1.1
CHGBP05060 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC21.93■■□□□ 1.1
CHGBP05060 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC21.93■■□□□ 1.1
CHGBP05060 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC21.93■■□□□ 1.1
CHGBP05060 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC21.93■■□□□ 1.1
CHGBP05060 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC21.93■■□□□ 1.1
CHGBP05060 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
CHGBP05060 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC21.93■■□□□ 1.1
CHGBP05060 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC21.93■■□□□ 1.1
CHGBP05060 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CHGBP05060 COMP-202ENST00000425807 2292 ntTSL 2 BASIC21.92■■□□□ 1.1
CHGBP05060 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC21.92■■□□□ 1.1
CHGBP05060 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC21.92■■□□□ 1.1
CHGBP05060 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC21.92■■□□□ 1.1
CHGBP05060 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CHGBP05060 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC21.92■■□□□ 1.1
CHGBP05060 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
CHGBP05060 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CHGBP05060 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC21.92■■□□□ 1.1
CHGBP05060 AL845331.1-201ENST00000424978 1190 ntBASIC21.92■■□□□ 1.1
CHGBP05060 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CHGBP05060 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC21.92■■□□□ 1.1
CHGBP05060 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC21.92■■□□□ 1.1
CHGBP05060 AC091607.1-201ENST00000490318 1060 ntBASIC21.92■■□□□ 1.1
CHGBP05060 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC21.92■■□□□ 1.1
CHGBP05060 AC009065.1-201ENST00000564055 1225 ntBASIC21.92■■□□□ 1.1
CHGBP05060 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC21.92■■□□□ 1.1
CHGBP05060 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC21.92■■□□□ 1.1
CHGBP05060 GPR32P1-201ENST00000601788 811 ntBASIC21.92■■□□□ 1.1
CHGBP05060 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC21.92■■□□□ 1.1
CHGBP05060 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CHGBP05060 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
CHGBP05060 REXO1L9P-201ENST00000604264 2108 ntBASIC21.92■■□□□ 1.1
CHGBP05060 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC21.92■■□□□ 1.1
CHGBP05060 POR-209ENST00000439269 1858 ntTSL 2 BASIC21.92■■□□□ 1.1
CHGBP05060 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CHGBP05060 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms