Protein–RNA interactions for Protein: P04406

GAPDH, Glyceraldehyde-3-phosphate dehydrogenase, humanhuman

Known RBP Predictions only

Length 335 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GAPDHP04406 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
GAPDHP04406 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
GAPDHP04406 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC15.34■□□□□ 0.05
GAPDHP04406 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC15.34■□□□□ 0.05
GAPDHP04406 CRYGFP-201ENST00000418459 633 ntBASIC15.34■□□□□ 0.05
GAPDHP04406 MFAP1P1-201ENST00000442257 1255 ntBASIC15.34■□□□□ 0.05
GAPDHP04406 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
GAPDHP04406 PCDHA12-202ENST00000613593 2588 ntBASIC15.34■□□□□ 0.05
GAPDHP04406 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
GAPDHP04406 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC15.34■□□□□ 0.05
GAPDHP04406 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC15.34■□□□□ 0.05
GAPDHP04406 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
GAPDHP04406 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
GAPDHP04406 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
GAPDHP04406 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
GAPDHP04406 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
GAPDHP04406 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
GAPDHP04406 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
GAPDHP04406 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
GAPDHP04406 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC15.33■□□□□ 0.05
GAPDHP04406 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
GAPDHP04406 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC15.33■□□□□ 0.05
GAPDHP04406 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
GAPDHP04406 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
GAPDHP04406 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
GAPDHP04406 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.05
GAPDHP04406 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
GAPDHP04406 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
GAPDHP04406 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
GAPDHP04406 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
GAPDHP04406 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
GAPDHP04406 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC15.33■□□□□ 0.04
GAPDHP04406 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
GAPDHP04406 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC15.33■□□□□ 0.04
GAPDHP04406 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC15.33■□□□□ 0.04
GAPDHP04406 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC15.33■□□□□ 0.04
GAPDHP04406 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC15.33■□□□□ 0.04
GAPDHP04406 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC15.33■□□□□ 0.04
GAPDHP04406 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC15.33■□□□□ 0.04
GAPDHP04406 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
GAPDHP04406 GNE-204ENST00000539208 2190 ntTSL 2 BASIC15.33■□□□□ 0.04
GAPDHP04406 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
GAPDHP04406 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC15.33■□□□□ 0.04
GAPDHP04406 TNRC18P3-201ENST00000441896 2691 ntBASIC15.33■□□□□ 0.04
GAPDHP04406 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
GAPDHP04406 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC15.33■□□□□ 0.04
GAPDHP04406 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
GAPDHP04406 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
GAPDHP04406 KRT8P3-201ENST00000519669 1449 ntBASIC15.33■□□□□ 0.04
GAPDHP04406 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC15.33■□□□□ 0.04
GAPDHP04406 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
GAPDHP04406 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
GAPDHP04406 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC15.32■□□□□ 0.04
GAPDHP04406 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC15.32■□□□□ 0.04
GAPDHP04406 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC15.32■□□□□ 0.04
GAPDHP04406 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
GAPDHP04406 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
GAPDHP04406 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
GAPDHP04406 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
GAPDHP04406 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC15.32■□□□□ 0.04
GAPDHP04406 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
GAPDHP04406 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC15.32■□□□□ 0.04
GAPDHP04406 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC15.32■□□□□ 0.04
GAPDHP04406 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
GAPDHP04406 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC15.32■□□□□ 0.04
GAPDHP04406 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC15.32■□□□□ 0.04
GAPDHP04406 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC15.32■□□□□ 0.04
GAPDHP04406 AC093827.2-201ENST00000512654 315 ntBASIC15.32■□□□□ 0.04
GAPDHP04406 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
GAPDHP04406 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC15.32■□□□□ 0.04
GAPDHP04406 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC15.32■□□□□ 0.04
GAPDHP04406 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC15.32■□□□□ 0.04
GAPDHP04406 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC15.32■□□□□ 0.04
GAPDHP04406 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC15.32■□□□□ 0.04
GAPDHP04406 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
GAPDHP04406 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
GAPDHP04406 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
GAPDHP04406 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
GAPDHP04406 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC15.32■□□□□ 0.04
GAPDHP04406 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
GAPDHP04406 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
GAPDHP04406 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
GAPDHP04406 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC15.32■□□□□ 0.04
GAPDHP04406 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
GAPDHP04406 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC15.32■□□□□ 0.04
GAPDHP04406 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC15.32■□□□□ 0.04
GAPDHP04406 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
GAPDHP04406 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC15.32■□□□□ 0.04
GAPDHP04406 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
GAPDHP04406 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
GAPDHP04406 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC15.32■□□□□ 0.04
GAPDHP04406 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
GAPDHP04406 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC15.32■□□□□ 0.04
GAPDHP04406 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
GAPDHP04406 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
GAPDHP04406 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
GAPDHP04406 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC15.32■□□□□ 0.04
GAPDHP04406 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC15.32■□□□□ 0.04
GAPDHP04406 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
GAPDHP04406 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 48.8 ms