Protein–RNA interactions for Protein: P04198

MYCN, N-myc proto-oncogene protein, humanhuman

Predicted RBP Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MYCNP04198 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
MYCNP04198 ABI1-206ENST00000376140 1446 ntTSL 5 BASIC20.93■□□□□ 0.94
MYCNP04198 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC20.93■□□□□ 0.94
MYCNP04198 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
MYCNP04198 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
MYCNP04198 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
MYCNP04198 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC20.93■□□□□ 0.94
MYCNP04198 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
MYCNP04198 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
MYCNP04198 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC20.92■□□□□ 0.94
MYCNP04198 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
MYCNP04198 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
MYCNP04198 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
MYCNP04198 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
MYCNP04198 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
MYCNP04198 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
MYCNP04198 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
MYCNP04198 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
MYCNP04198 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
MYCNP04198 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
MYCNP04198 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
MYCNP04198 TPRG1-AS2-201ENST00000425454 479 ntTSL 5 BASIC20.92■□□□□ 0.94
MYCNP04198 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC20.92■□□□□ 0.94
MYCNP04198 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC20.92■□□□□ 0.94
MYCNP04198 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC20.92■□□□□ 0.94
MYCNP04198 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC20.92■□□□□ 0.94
MYCNP04198 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC20.92■□□□□ 0.94
MYCNP04198 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC20.92■□□□□ 0.94
MYCNP04198 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC20.92■□□□□ 0.94
MYCNP04198 PSMG2-210ENST00000590217 1036 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
MYCNP04198 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC20.92■□□□□ 0.94
MYCNP04198 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
MYCNP04198 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC20.92■□□□□ 0.94
MYCNP04198 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
MYCNP04198 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
MYCNP04198 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC20.92■□□□□ 0.94
MYCNP04198 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
MYCNP04198 LBX2-AS1-202ENST00000603175 2083 ntBASIC20.92■□□□□ 0.94
MYCNP04198 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
MYCNP04198 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
MYCNP04198 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
MYCNP04198 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
MYCNP04198 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
MYCNP04198 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
MYCNP04198 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
MYCNP04198 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
MYCNP04198 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
MYCNP04198 DEFT1P-201ENST00000453425 496 ntBASIC20.91■□□□□ 0.94
MYCNP04198 PDCD10-207ENST00000471885 764 ntTSL 5 BASIC20.91■□□□□ 0.94
MYCNP04198 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC20.91■□□□□ 0.94
MYCNP04198 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
MYCNP04198 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
MYCNP04198 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
MYCNP04198 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC20.91■□□□□ 0.94
MYCNP04198 C14orf132-204ENST00000556728 774 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
MYCNP04198 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC20.91■□□□□ 0.94
MYCNP04198 AC087289.5-201ENST00000586076 3175 ntBASIC20.91■□□□□ 0.94
MYCNP04198 TK1-205ENST00000590862 642 ntTSL 3 BASIC20.91■□□□□ 0.94
MYCNP04198 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC20.91■□□□□ 0.94
MYCNP04198 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
MYCNP04198 STARD13-AS-240ENST00000609608 865 ntTSL 5 BASIC20.91■□□□□ 0.94
MYCNP04198 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
MYCNP04198 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
MYCNP04198 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
MYCNP04198 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
MYCNP04198 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC20.9■□□□□ 0.94
MYCNP04198 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
MYCNP04198 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC20.9■□□□□ 0.94
MYCNP04198 Z82202.1-201ENST00000623446 1880 ntBASIC20.9■□□□□ 0.94
MYCNP04198 GABARAPL3-202ENST00000624044 1851 ntBASIC20.9■□□□□ 0.94
MYCNP04198 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
MYCNP04198 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
MYCNP04198 AC233702.3-201ENST00000578656 1387 ntBASIC20.9■□□□□ 0.94
MYCNP04198 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC20.9■□□□□ 0.94
MYCNP04198 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
MYCNP04198 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
MYCNP04198 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
MYCNP04198 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC20.9■□□□□ 0.94
MYCNP04198 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
MYCNP04198 NUS1P2-201ENST00000417358 873 ntBASIC20.9■□□□□ 0.94
MYCNP04198 AL590627.1-203ENST00000421194 1026 ntBASIC20.9■□□□□ 0.94
MYCNP04198 EAF2-202ENST00000451944 960 ntTSL 2 BASIC20.9■□□□□ 0.94
MYCNP04198 CAB39P1-201ENST00000502277 460 ntBASIC20.9■□□□□ 0.94
MYCNP04198 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC20.9■□□□□ 0.94
MYCNP04198 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC20.9■□□□□ 0.94
MYCNP04198 Z69720.1-201ENST00000601483 472 ntBASIC20.9■□□□□ 0.94
MYCNP04198 UBE2NL-201ENST00000618570 1185 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
MYCNP04198 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
MYCNP04198 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
MYCNP04198 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
MYCNP04198 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC20.9■□□□□ 0.94
MYCNP04198 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
MYCNP04198 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC20.9■□□□□ 0.94
MYCNP04198 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
MYCNP04198 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
MYCNP04198 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
MYCNP04198 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
MYCNP04198 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC20.89■□□□□ 0.94
MYCNP04198 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC20.89■□□□□ 0.94
MYCNP04198 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms