Protein–RNA interactions for Protein: P04114

APOB, Apolipoprotein B-100, humanhuman

Known RBP Predictions only

Length 4,563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBP04114 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC11.35□□□□□ -0.59
APOBP04114 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC11.35□□□□□ -0.59
APOBP04114 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
APOBP04114 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC11.35□□□□□ -0.59
APOBP04114 CHRNA5-203ENST00000559554 1051 ntTSL 3 BASIC11.35□□□□□ -0.59
APOBP04114 AC018845.2-201ENST00000568326 409 ntBASIC11.35□□□□□ -0.59
APOBP04114 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC11.35□□□□□ -0.59
APOBP04114 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
APOBP04114 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
APOBP04114 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC11.35□□□□□ -0.59
APOBP04114 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC11.35□□□□□ -0.59
APOBP04114 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
APOBP04114 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC11.35□□□□□ -0.59
APOBP04114 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
APOBP04114 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
APOBP04114 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC11.35□□□□□ -0.59
APOBP04114 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
APOBP04114 AC254562.1-201ENST00000417586 456 ntBASIC11.35□□□□□ -0.59
APOBP04114 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC11.35□□□□□ -0.59
APOBP04114 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC11.35□□□□□ -0.59
APOBP04114 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC11.35□□□□□ -0.59
APOBP04114 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
APOBP04114 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC11.35□□□□□ -0.59
APOBP04114 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC11.35□□□□□ -0.59
APOBP04114 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
APOBP04114 MTDHP4-201ENST00000600287 670 ntBASIC11.35□□□□□ -0.59
APOBP04114 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC11.35□□□□□ -0.59
APOBP04114 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC11.35□□□□□ -0.59
APOBP04114 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC11.35□□□□□ -0.59
APOBP04114 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC11.35□□□□□ -0.59
APOBP04114 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC11.35□□□□□ -0.59
APOBP04114 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
APOBP04114 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC11.35□□□□□ -0.59
APOBP04114 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
APOBP04114 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
APOBP04114 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
APOBP04114 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC11.35□□□□□ -0.59
APOBP04114 PTMS-202ENST00000389462 773 ntTSL 2 BASIC11.35□□□□□ -0.59
APOBP04114 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
APOBP04114 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
APOBP04114 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
APOBP04114 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC11.34□□□□□ -0.59
APOBP04114 COPE-202ENST00000349893 948 ntTSL 2 BASIC11.34□□□□□ -0.59
APOBP04114 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC11.34□□□□□ -0.59
APOBP04114 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC11.34□□□□□ -0.59
APOBP04114 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC11.34□□□□□ -0.59
APOBP04114 AC109322.1-201ENST00000524499 1264 ntBASIC11.34□□□□□ -0.59
APOBP04114 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
APOBP04114 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
APOBP04114 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC11.34□□□□□ -0.59
APOBP04114 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
APOBP04114 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
APOBP04114 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC11.34□□□□□ -0.59
APOBP04114 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC11.34□□□□□ -0.59
APOBP04114 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC11.34□□□□□ -0.59
APOBP04114 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
APOBP04114 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC11.34□□□□□ -0.59
APOBP04114 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC11.34□□□□□ -0.59
APOBP04114 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
APOBP04114 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
APOBP04114 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC11.34□□□□□ -0.59
APOBP04114 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
APOBP04114 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC11.34□□□□□ -0.59
APOBP04114 AC136632.2-201ENST00000512891 861 ntBASIC11.34□□□□□ -0.59
APOBP04114 IGHV3-65-201ENST00000523210 341 ntBASIC11.34□□□□□ -0.59
APOBP04114 MAL2-202ENST00000531508 892 ntTSL 3 BASIC11.34□□□□□ -0.59
APOBP04114 AP002472.1-201ENST00000577490 586 ntBASIC11.34□□□□□ -0.59
APOBP04114 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC11.34□□□□□ -0.59
APOBP04114 METTL23-205ENST00000588302 925 ntTSL 5 BASIC11.34□□□□□ -0.59
APOBP04114 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC11.34□□□□□ -0.59
APOBP04114 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
APOBP04114 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC11.34□□□□□ -0.59
APOBP04114 CD82-202ENST00000342935 967 ntTSL 5 BASIC11.34□□□□□ -0.59
APOBP04114 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC11.34□□□□□ -0.59
APOBP04114 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC11.34□□□□□ -0.59
APOBP04114 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC11.34□□□□□ -0.59
APOBP04114 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC11.34□□□□□ -0.59
APOBP04114 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC11.34□□□□□ -0.59
APOBP04114 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
APOBP04114 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC11.34□□□□□ -0.59
APOBP04114 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC11.33□□□□□ -0.59
APOBP04114 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
APOBP04114 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC11.33□□□□□ -0.6
APOBP04114 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
APOBP04114 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC11.33□□□□□ -0.6
APOBP04114 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC11.33□□□□□ -0.6
APOBP04114 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC11.33□□□□□ -0.6
APOBP04114 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
APOBP04114 BX005266.1-201ENST00000473402 457 ntBASIC11.33□□□□□ -0.6
APOBP04114 IGHV3OR16-6-201ENST00000568775 360 ntBASIC11.33□□□□□ -0.6
APOBP04114 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC11.33□□□□□ -0.6
APOBP04114 Z92544.3-201ENST00000624747 417 ntBASIC11.33□□□□□ -0.6
APOBP04114 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
APOBP04114 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC11.33□□□□□ -0.6
APOBP04114 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC11.33□□□□□ -0.6
APOBP04114 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC11.33□□□□□ -0.6
APOBP04114 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
APOBP04114 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC11.33□□□□□ -0.6
APOBP04114 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC11.33□□□□□ -0.6
APOBP04114 AC023141.5-201ENST00000458585 616 ntBASIC11.33□□□□□ -0.6
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms