Protein–RNA interactions for Protein: P03897

MT-ND3, NADH-ubiquinone oxidoreductase chain 3, humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND3P03897 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
MT-ND3P03897 SLC25A6P5-201ENST00000435663 894 ntBASIC18.66■□□□□ 0.58
MT-ND3P03897 AC116562.2-201ENST00000507042 360 ntBASIC18.66■□□□□ 0.58
MT-ND3P03897 GLRB-205ENST00000512619 728 ntTSL 3 BASIC18.66■□□□□ 0.58
MT-ND3P03897 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC18.66■□□□□ 0.58
MT-ND3P03897 PPOX-219ENST00000544598 813 ntTSL 2 BASIC18.66■□□□□ 0.58
MT-ND3P03897 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC18.66■□□□□ 0.58
MT-ND3P03897 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC18.66■□□□□ 0.58
MT-ND3P03897 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC18.66■□□□□ 0.58
MT-ND3P03897 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC18.66■□□□□ 0.58
MT-ND3P03897 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
MT-ND3P03897 AL031985.4-201ENST00000642138 673 ntBASIC18.66■□□□□ 0.58
MT-ND3P03897 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
MT-ND3P03897 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
MT-ND3P03897 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC18.66■□□□□ 0.58
MT-ND3P03897 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
MT-ND3P03897 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC18.66■□□□□ 0.58
MT-ND3P03897 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
MT-ND3P03897 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
MT-ND3P03897 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC18.66■□□□□ 0.58
MT-ND3P03897 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
MT-ND3P03897 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
MT-ND3P03897 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC18.65■□□□□ 0.58
MT-ND3P03897 LINC00896-202ENST00000609602 2128 ntBASIC18.65■□□□□ 0.58
MT-ND3P03897 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC18.65■□□□□ 0.58
MT-ND3P03897 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
MT-ND3P03897 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
MT-ND3P03897 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
MT-ND3P03897 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
MT-ND3P03897 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
MT-ND3P03897 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC18.65■□□□□ 0.58
MT-ND3P03897 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
MT-ND3P03897 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
MT-ND3P03897 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC18.65■□□□□ 0.58
MT-ND3P03897 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
MT-ND3P03897 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
MT-ND3P03897 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
MT-ND3P03897 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC18.65■□□□□ 0.58
MT-ND3P03897 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
MT-ND3P03897 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
MT-ND3P03897 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC18.65■□□□□ 0.58
MT-ND3P03897 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
MT-ND3P03897 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC18.65■□□□□ 0.58
MT-ND3P03897 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC18.65■□□□□ 0.58
MT-ND3P03897 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
MT-ND3P03897 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
MT-ND3P03897 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
MT-ND3P03897 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
MT-ND3P03897 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
MT-ND3P03897 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
MT-ND3P03897 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC18.65■□□□□ 0.58
MT-ND3P03897 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
MT-ND3P03897 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC18.64■□□□□ 0.58
MT-ND3P03897 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
MT-ND3P03897 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
MT-ND3P03897 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
MT-ND3P03897 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
MT-ND3P03897 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC18.64■□□□□ 0.57
MT-ND3P03897 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
MT-ND3P03897 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC18.64■□□□□ 0.57
MT-ND3P03897 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
MT-ND3P03897 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
MT-ND3P03897 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC18.64■□□□□ 0.57
MT-ND3P03897 TK2-213ENST00000563369 882 ntTSL 5 BASIC18.64■□□□□ 0.57
MT-ND3P03897 AC010331.1-201ENST00000611423 582 ntBASIC18.64■□□□□ 0.57
MT-ND3P03897 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC18.64■□□□□ 0.57
MT-ND3P03897 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC18.64■□□□□ 0.57
MT-ND3P03897 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
MT-ND3P03897 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC18.64■□□□□ 0.57
MT-ND3P03897 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.57
MT-ND3P03897 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
MT-ND3P03897 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.57
MT-ND3P03897 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC18.64■□□□□ 0.57
MT-ND3P03897 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
MT-ND3P03897 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC18.64■□□□□ 0.57
MT-ND3P03897 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
MT-ND3P03897 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC18.63■□□□□ 0.57
MT-ND3P03897 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC18.63■□□□□ 0.57
MT-ND3P03897 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
MT-ND3P03897 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
MT-ND3P03897 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
MT-ND3P03897 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
MT-ND3P03897 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
MT-ND3P03897 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
MT-ND3P03897 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC18.63■□□□□ 0.57
MT-ND3P03897 AC008556.1-201ENST00000610908 2040 ntBASIC18.63■□□□□ 0.57
MT-ND3P03897 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
MT-ND3P03897 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
MT-ND3P03897 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC18.63■□□□□ 0.57
MT-ND3P03897 AC026271.3-201ENST00000571884 352 ntBASIC18.63■□□□□ 0.57
MT-ND3P03897 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC18.63■□□□□ 0.57
MT-ND3P03897 AC145285.6-201ENST00000604632 637 ntBASIC18.63■□□□□ 0.57
MT-ND3P03897 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
MT-ND3P03897 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
MT-ND3P03897 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC18.63■□□□□ 0.57
MT-ND3P03897 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
MT-ND3P03897 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
MT-ND3P03897 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
MT-ND3P03897 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC18.63■□□□□ 0.57
MT-ND3P03897 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms