Protein–RNA interactions for Protein: P01562

IFNA1, Interferon alpha-1/13, humanhuman

Predictions only

Length 189 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFNA1P01562 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
IFNA1P01562 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC14.5□□□□□ -0.09
IFNA1P01562 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
IFNA1P01562 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC14.5□□□□□ -0.09
IFNA1P01562 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
IFNA1P01562 KATNBL1P6-202ENST00000562413 1466 ntBASIC14.5□□□□□ -0.09
IFNA1P01562 SPN-201ENST00000360121 6894 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
IFNA1P01562 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC14.49□□□□□ -0.09
IFNA1P01562 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
IFNA1P01562 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
IFNA1P01562 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
IFNA1P01562 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
IFNA1P01562 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
IFNA1P01562 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
IFNA1P01562 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
IFNA1P01562 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC14.49□□□□□ -0.09
IFNA1P01562 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC14.49□□□□□ -0.09
IFNA1P01562 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC14.49□□□□□ -0.09
IFNA1P01562 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC14.49□□□□□ -0.09
IFNA1P01562 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
IFNA1P01562 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
IFNA1P01562 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
IFNA1P01562 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC14.49□□□□□ -0.09
IFNA1P01562 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC14.49□□□□□ -0.09
IFNA1P01562 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
IFNA1P01562 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC14.49□□□□□ -0.09
IFNA1P01562 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC14.49□□□□□ -0.09
IFNA1P01562 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC14.49□□□□□ -0.09
IFNA1P01562 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
IFNA1P01562 AC106739.1-201ENST00000617035 715 ntBASIC14.49□□□□□ -0.09
IFNA1P01562 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
IFNA1P01562 GOLGA6L5P-202ENST00000515341 1828 ntBASIC14.49□□□□□ -0.09
IFNA1P01562 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
IFNA1P01562 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
IFNA1P01562 AP006587.1-201ENST00000534129 1502 ntBASIC14.49□□□□□ -0.09
IFNA1P01562 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC14.49□□□□□ -0.09
IFNA1P01562 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
IFNA1P01562 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
IFNA1P01562 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC14.49□□□□□ -0.09
IFNA1P01562 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC14.49□□□□□ -0.09
IFNA1P01562 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
IFNA1P01562 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
IFNA1P01562 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
IFNA1P01562 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
IFNA1P01562 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
IFNA1P01562 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC14.49□□□□□ -0.09
IFNA1P01562 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
IFNA1P01562 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
IFNA1P01562 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC14.49□□□□□ -0.09
IFNA1P01562 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
IFNA1P01562 AC018695.7-201ENST00000624587 2492 ntBASIC14.49□□□□□ -0.09
IFNA1P01562 AC004854.2-201ENST00000608450 1441 ntBASIC14.49□□□□□ -0.09
IFNA1P01562 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
IFNA1P01562 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
IFNA1P01562 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
IFNA1P01562 AP001094.4-201ENST00000579008 2176 ntBASIC14.49□□□□□ -0.09
IFNA1P01562 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
IFNA1P01562 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
IFNA1P01562 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC14.48□□□□□ -0.09
IFNA1P01562 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC14.48□□□□□ -0.09
IFNA1P01562 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
IFNA1P01562 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC14.48□□□□□ -0.09
IFNA1P01562 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC14.48□□□□□ -0.09
IFNA1P01562 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
IFNA1P01562 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
IFNA1P01562 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
IFNA1P01562 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
IFNA1P01562 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
IFNA1P01562 NXN-202ENST00000537628 1340 ntTSL 3 BASIC14.48□□□□□ -0.09
IFNA1P01562 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
IFNA1P01562 AC022211.2-201ENST00000585075 2527 ntBASIC14.48□□□□□ -0.09
IFNA1P01562 WSCD1-201ENST00000317744 5819 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
IFNA1P01562 MOK-233ENST00000524214 1539 ntTSL 2 BASIC14.48□□□□□ -0.09
IFNA1P01562 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC14.48□□□□□ -0.09
IFNA1P01562 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
IFNA1P01562 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
IFNA1P01562 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
IFNA1P01562 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
IFNA1P01562 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
IFNA1P01562 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
IFNA1P01562 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
IFNA1P01562 NME9-203ENST00000383180 2133 ntTSL 2 BASIC14.48□□□□□ -0.09
IFNA1P01562 NFYC-AS1-201ENST00000606277 1687 ntBASIC14.48□□□□□ -0.09
IFNA1P01562 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC14.48□□□□□ -0.09
IFNA1P01562 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC14.48□□□□□ -0.09
IFNA1P01562 KRT8P45-201ENST00000414328 1447 ntBASIC14.48□□□□□ -0.09
IFNA1P01562 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC14.48□□□□□ -0.09
IFNA1P01562 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC14.48□□□□□ -0.09
IFNA1P01562 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
IFNA1P01562 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
IFNA1P01562 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
IFNA1P01562 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC14.48□□□□□ -0.09
IFNA1P01562 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
IFNA1P01562 STK4-201ENST00000372801 2038 ntTSL 2 BASIC14.48□□□□□ -0.09
IFNA1P01562 AC008556.1-201ENST00000610908 2040 ntBASIC14.48□□□□□ -0.09
IFNA1P01562 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC14.48□□□□□ -0.09
IFNA1P01562 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC14.47□□□□□ -0.09
IFNA1P01562 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
IFNA1P01562 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC14.47□□□□□ -0.09
IFNA1P01562 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC14.47□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms