Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
PDGFBP01127 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC18.31■□□□□ 0.52
PDGFBP01127 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
PDGFBP01127 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PDGFBP01127 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
PDGFBP01127 SLC4A1APP2-201ENST00000424054 1259 ntBASIC18.31■□□□□ 0.52
PDGFBP01127 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC18.31■□□□□ 0.52
PDGFBP01127 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC18.31■□□□□ 0.52
PDGFBP01127 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
PDGFBP01127 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC18.31■□□□□ 0.52
PDGFBP01127 AP000867.4-201ENST00000641616 219 ntBASIC18.31■□□□□ 0.52
PDGFBP01127 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PDGFBP01127 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PDGFBP01127 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
PDGFBP01127 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PDGFBP01127 ELL2P1-201ENST00000413990 1906 ntBASIC18.31■□□□□ 0.52
PDGFBP01127 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
PDGFBP01127 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC18.31■□□□□ 0.52
PDGFBP01127 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PDGFBP01127 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC18.31■□□□□ 0.52
PDGFBP01127 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PDGFBP01127 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PDGFBP01127 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PDGFBP01127 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC18.3■□□□□ 0.52
PDGFBP01127 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC18.3■□□□□ 0.52
PDGFBP01127 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
PDGFBP01127 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PDGFBP01127 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC18.3■□□□□ 0.52
PDGFBP01127 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
PDGFBP01127 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
PDGFBP01127 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC18.3■□□□□ 0.52
PDGFBP01127 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC18.3■□□□□ 0.52
PDGFBP01127 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC18.3■□□□□ 0.52
PDGFBP01127 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC18.3■□□□□ 0.52
PDGFBP01127 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC18.3■□□□□ 0.52
PDGFBP01127 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
PDGFBP01127 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PDGFBP01127 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PDGFBP01127 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC18.3■□□□□ 0.52
PDGFBP01127 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PDGFBP01127 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC18.3■□□□□ 0.52
PDGFBP01127 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC18.3■□□□□ 0.52
PDGFBP01127 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
PDGFBP01127 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC18.3■□□□□ 0.52
PDGFBP01127 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PDGFBP01127 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PDGFBP01127 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PDGFBP01127 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
PDGFBP01127 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
PDGFBP01127 PALM-208ENST00000592155 2272 ntTSL 4 BASIC18.29■□□□□ 0.52
PDGFBP01127 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
PDGFBP01127 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PDGFBP01127 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PDGFBP01127 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PDGFBP01127 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
PDGFBP01127 AL139400.1-201ENST00000366220 510 ntBASIC18.29■□□□□ 0.52
PDGFBP01127 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC18.29■□□□□ 0.52
PDGFBP01127 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC18.29■□□□□ 0.52
PDGFBP01127 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC18.29■□□□□ 0.52
PDGFBP01127 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
PDGFBP01127 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
PDGFBP01127 AC092474.2-201ENST00000424288 719 ntBASIC18.29■□□□□ 0.52
PDGFBP01127 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
PDGFBP01127 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC18.29■□□□□ 0.52
PDGFBP01127 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC18.29■□□□□ 0.52
PDGFBP01127 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC18.29■□□□□ 0.52
PDGFBP01127 GREM1-201ENST00000560677 623 ntTSL 4 BASIC18.29■□□□□ 0.52
PDGFBP01127 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC18.29■□□□□ 0.52
PDGFBP01127 PRR29-209ENST00000582540 967 ntTSL 2 BASIC18.29■□□□□ 0.52
PDGFBP01127 AC093512.1-201ENST00000617969 520 ntBASIC18.29■□□□□ 0.52
PDGFBP01127 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC18.29■□□□□ 0.52
PDGFBP01127 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
PDGFBP01127 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC18.29■□□□□ 0.52
PDGFBP01127 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PDGFBP01127 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC18.29■□□□□ 0.52
PDGFBP01127 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PDGFBP01127 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PDGFBP01127 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PDGFBP01127 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC18.28■□□□□ 0.52
PDGFBP01127 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC18.28■□□□□ 0.52
PDGFBP01127 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PDGFBP01127 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
PDGFBP01127 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
PDGFBP01127 LINC00602-201ENST00000629776 2065 ntBASIC18.28■□□□□ 0.52
PDGFBP01127 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
PDGFBP01127 CD99-202ENST00000381180 530 ntTSL 2 BASIC18.28■□□□□ 0.52
PDGFBP01127 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC18.28■□□□□ 0.52
PDGFBP01127 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
PDGFBP01127 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC18.28■□□□□ 0.52
PDGFBP01127 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
PDGFBP01127 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC18.28■□□□□ 0.52
PDGFBP01127 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC18.28■□□□□ 0.52
PDGFBP01127 AC138761.1-201ENST00000584393 385 ntBASIC18.28■□□□□ 0.52
PDGFBP01127 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC18.28■□□□□ 0.52
PDGFBP01127 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC18.28■□□□□ 0.52
PDGFBP01127 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC18.28■□□□□ 0.52
PDGFBP01127 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
PDGFBP01127 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PDGFBP01127 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
PDGFBP01127 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms