Protein–RNA interactions for Protein: O76031

CLPX, ATP-dependent Clp protease ATP-binding subunit clpX-like, mitochondrial, humanhuman

Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPXO76031 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CLPXO76031 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
CLPXO76031 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
CLPXO76031 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
CLPXO76031 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
CLPXO76031 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC16.62■□□□□ 0.25
CLPXO76031 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
CLPXO76031 PPP1R14BP2-201ENST00000426284 444 ntBASIC16.62■□□□□ 0.25
CLPXO76031 POU5F1P3-201ENST00000428824 1078 ntBASIC16.62■□□□□ 0.25
CLPXO76031 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC16.62■□□□□ 0.25
CLPXO76031 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
CLPXO76031 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC16.62■□□□□ 0.25
CLPXO76031 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC16.62■□□□□ 0.25
CLPXO76031 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC16.62■□□□□ 0.25
CLPXO76031 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CLPXO76031 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CLPXO76031 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CLPXO76031 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
CLPXO76031 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC16.62■□□□□ 0.25
CLPXO76031 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CLPXO76031 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC16.62■□□□□ 0.25
CLPXO76031 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CLPXO76031 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CLPXO76031 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CLPXO76031 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC16.62■□□□□ 0.25
CLPXO76031 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CLPXO76031 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CLPXO76031 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
CLPXO76031 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CLPXO76031 AL499627.1-201ENST00000569373 2188 ntBASIC16.61■□□□□ 0.25
CLPXO76031 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CLPXO76031 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CLPXO76031 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CLPXO76031 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC16.61■□□□□ 0.25
CLPXO76031 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CLPXO76031 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC16.61■□□□□ 0.25
CLPXO76031 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CLPXO76031 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
CLPXO76031 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
CLPXO76031 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC16.61■□□□□ 0.25
CLPXO76031 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC16.61■□□□□ 0.25
CLPXO76031 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC16.61■□□□□ 0.25
CLPXO76031 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC16.61■□□□□ 0.25
CLPXO76031 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC16.61■□□□□ 0.25
CLPXO76031 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC16.61■□□□□ 0.25
CLPXO76031 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CLPXO76031 AC092118.2-201ENST00000613495 667 ntBASIC16.61■□□□□ 0.25
CLPXO76031 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC16.61■□□□□ 0.25
CLPXO76031 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
CLPXO76031 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC16.61■□□□□ 0.25
CLPXO76031 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC16.61■□□□□ 0.25
CLPXO76031 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CLPXO76031 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CLPXO76031 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC16.61■□□□□ 0.25
CLPXO76031 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CLPXO76031 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC16.61■□□□□ 0.25
CLPXO76031 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
CLPXO76031 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC16.61■□□□□ 0.25
CLPXO76031 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CLPXO76031 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CLPXO76031 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
CLPXO76031 AC116351.2-201ENST00000606540 1585 ntBASIC16.6■□□□□ 0.25
CLPXO76031 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC16.6■□□□□ 0.25
CLPXO76031 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
CLPXO76031 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC16.6■□□□□ 0.25
CLPXO76031 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CLPXO76031 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
CLPXO76031 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CLPXO76031 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
CLPXO76031 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CLPXO76031 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
CLPXO76031 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CLPXO76031 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC16.6■□□□□ 0.25
CLPXO76031 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CLPXO76031 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CLPXO76031 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CLPXO76031 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC16.6■□□□□ 0.25
CLPXO76031 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC16.6■□□□□ 0.25
CLPXO76031 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC16.6■□□□□ 0.25
CLPXO76031 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CLPXO76031 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CLPXO76031 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC16.6■□□□□ 0.25
CLPXO76031 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC16.6■□□□□ 0.25
CLPXO76031 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
CLPXO76031 ITM2C-210ENST00000620962 501 ntBASIC16.6■□□□□ 0.25
CLPXO76031 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC16.6■□□□□ 0.25
CLPXO76031 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
CLPXO76031 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
CLPXO76031 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC16.6■□□□□ 0.25
CLPXO76031 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC16.6■□□□□ 0.25
CLPXO76031 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC16.6■□□□□ 0.25
CLPXO76031 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CLPXO76031 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC16.6■□□□□ 0.25
CLPXO76031 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC16.6■□□□□ 0.25
CLPXO76031 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CLPXO76031 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CLPXO76031 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
CLPXO76031 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CLPXO76031 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
CLPXO76031 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC16.6■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms