Protein–RNA interactions for Protein: O60294

LCMT2, tRNA wybutosine-synthesizing protein 4, humanhuman

Known RBP Predictions only

Length 686 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCMT2O60294 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
LCMT2O60294 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
LCMT2O60294 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
LCMT2O60294 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
LCMT2O60294 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
LCMT2O60294 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
LCMT2O60294 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
LCMT2O60294 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
LCMT2O60294 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
LCMT2O60294 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
LCMT2O60294 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
LCMT2O60294 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
LCMT2O60294 AL031133.1-201ENST00000406807 723 ntBASIC17.48■□□□□ 0.39
LCMT2O60294 MIR1224-201ENST00000408193 85 ntBASIC17.48■□□□□ 0.39
LCMT2O60294 AC010331.1-201ENST00000611423 582 ntBASIC17.48■□□□□ 0.39
LCMT2O60294 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
LCMT2O60294 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
LCMT2O60294 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
LCMT2O60294 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
LCMT2O60294 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
LCMT2O60294 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
LCMT2O60294 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
LCMT2O60294 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
LCMT2O60294 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
LCMT2O60294 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
LCMT2O60294 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
LCMT2O60294 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
LCMT2O60294 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
LCMT2O60294 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
LCMT2O60294 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
LCMT2O60294 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
LCMT2O60294 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
LCMT2O60294 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
LCMT2O60294 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
LCMT2O60294 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC17.47■□□□□ 0.39
LCMT2O60294 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
LCMT2O60294 VENTXP5-201ENST00000523979 775 ntBASIC17.47■□□□□ 0.39
LCMT2O60294 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC17.47■□□□□ 0.39
LCMT2O60294 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC17.47■□□□□ 0.39
LCMT2O60294 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
LCMT2O60294 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
LCMT2O60294 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
LCMT2O60294 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC17.47■□□□□ 0.39
LCMT2O60294 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
LCMT2O60294 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
LCMT2O60294 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
LCMT2O60294 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC17.47■□□□□ 0.39
LCMT2O60294 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC17.47■□□□□ 0.39
LCMT2O60294 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC17.47■□□□□ 0.39
LCMT2O60294 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
LCMT2O60294 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.39
LCMT2O60294 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
LCMT2O60294 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
LCMT2O60294 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC17.46■□□□□ 0.39
LCMT2O60294 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
LCMT2O60294 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC17.46■□□□□ 0.39
LCMT2O60294 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
LCMT2O60294 AL162741.1-201ENST00000565563 1558 ntBASIC17.46■□□□□ 0.39
LCMT2O60294 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
LCMT2O60294 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
LCMT2O60294 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.39
LCMT2O60294 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
LCMT2O60294 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
LCMT2O60294 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
LCMT2O60294 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
LCMT2O60294 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
LCMT2O60294 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
LCMT2O60294 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC17.46■□□□□ 0.39
LCMT2O60294 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC17.46■□□□□ 0.39
LCMT2O60294 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC17.46■□□□□ 0.39
LCMT2O60294 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC17.46■□□□□ 0.39
LCMT2O60294 AC024563.2-201ENST00000603282 481 ntBASIC17.46■□□□□ 0.39
LCMT2O60294 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
LCMT2O60294 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
LCMT2O60294 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
LCMT2O60294 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
LCMT2O60294 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
LCMT2O60294 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
LCMT2O60294 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC17.46■□□□□ 0.39
LCMT2O60294 PXK-206ENST00000463280 2825 ntTSL 2 BASIC17.46■□□□□ 0.39
LCMT2O60294 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC17.46■□□□□ 0.39
LCMT2O60294 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
LCMT2O60294 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
LCMT2O60294 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
LCMT2O60294 POR-209ENST00000439269 1858 ntTSL 2 BASIC17.46■□□□□ 0.38
LCMT2O60294 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
LCMT2O60294 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
LCMT2O60294 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
LCMT2O60294 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
LCMT2O60294 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
LCMT2O60294 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC17.45■□□□□ 0.38
LCMT2O60294 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
LCMT2O60294 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC17.45■□□□□ 0.38
LCMT2O60294 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
LCMT2O60294 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
LCMT2O60294 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
LCMT2O60294 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
LCMT2O60294 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
LCMT2O60294 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
LCMT2O60294 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC17.45■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms