Protein–RNA interactions for Protein: O60224

SSX4, Protein SSX4, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX4O60224 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC16.61■□□□□ 0.25
SSX4O60224 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
SSX4O60224 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SSX4O60224 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
SSX4O60224 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SSX4O60224 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SSX4O60224 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SSX4O60224 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
SSX4O60224 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
SSX4O60224 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC16.6■□□□□ 0.25
SSX4O60224 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
SSX4O60224 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC16.6■□□□□ 0.25
SSX4O60224 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
SSX4O60224 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
SSX4O60224 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
SSX4O60224 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
SSX4O60224 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC16.6■□□□□ 0.25
SSX4O60224 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
SSX4O60224 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
SSX4O60224 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC16.6■□□□□ 0.25
SSX4O60224 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SSX4O60224 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
SSX4O60224 AC113347.1-201ENST00000413321 391 ntBASIC16.6■□□□□ 0.25
SSX4O60224 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC16.6■□□□□ 0.25
SSX4O60224 TMA16-209ENST00000513272 803 ntTSL 2 BASIC16.6■□□□□ 0.25
SSX4O60224 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
SSX4O60224 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC16.6■□□□□ 0.25
SSX4O60224 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC16.6■□□□□ 0.25
SSX4O60224 C1QL1P1-201ENST00000568105 661 ntBASIC16.6■□□□□ 0.25
SSX4O60224 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC16.6■□□□□ 0.25
SSX4O60224 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
SSX4O60224 GRAMD4P8-201ENST00000605465 1115 ntBASIC16.6■□□□□ 0.25
SSX4O60224 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC16.6■□□□□ 0.25
SSX4O60224 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC16.6■□□□□ 0.25
SSX4O60224 AC010947.1-201ENST00000623454 693 ntBASIC16.6■□□□□ 0.25
SSX4O60224 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC16.6■□□□□ 0.25
SSX4O60224 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
SSX4O60224 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC16.6■□□□□ 0.25
SSX4O60224 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC16.6■□□□□ 0.25
SSX4O60224 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC16.6■□□□□ 0.25
SSX4O60224 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC16.6■□□□□ 0.25
SSX4O60224 FSCN1P1-201ENST00000568912 1481 ntBASIC16.6■□□□□ 0.25
SSX4O60224 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SSX4O60224 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC16.6■□□□□ 0.25
SSX4O60224 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SSX4O60224 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SSX4O60224 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SSX4O60224 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC16.6■□□□□ 0.25
SSX4O60224 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SSX4O60224 AC116351.2-201ENST00000606540 1585 ntBASIC16.6■□□□□ 0.25
SSX4O60224 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
SSX4O60224 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SSX4O60224 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SSX4O60224 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC16.59■□□□□ 0.25
SSX4O60224 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
SSX4O60224 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC16.59■□□□□ 0.25
SSX4O60224 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
SSX4O60224 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
SSX4O60224 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
SSX4O60224 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
SSX4O60224 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
SSX4O60224 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC16.59■□□□□ 0.25
SSX4O60224 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC16.59■□□□□ 0.25
SSX4O60224 CRAT-202ENST00000393384 973 ntTSL 2 BASIC16.59■□□□□ 0.25
SSX4O60224 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
SSX4O60224 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC16.59■□□□□ 0.25
SSX4O60224 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC16.59■□□□□ 0.25
SSX4O60224 AC018553.1-201ENST00000616682 1458 ntBASIC16.59■□□□□ 0.25
SSX4O60224 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
SSX4O60224 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SSX4O60224 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
SSX4O60224 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SSX4O60224 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SSX4O60224 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SSX4O60224 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
SSX4O60224 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
SSX4O60224 GNAS-203ENST00000306120 1878 ntBASIC16.59■□□□□ 0.25
SSX4O60224 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SSX4O60224 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SSX4O60224 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
SSX4O60224 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
SSX4O60224 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
SSX4O60224 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
SSX4O60224 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC16.58■□□□□ 0.25
SSX4O60224 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC16.58■□□□□ 0.25
SSX4O60224 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC16.58■□□□□ 0.25
SSX4O60224 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
SSX4O60224 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
SSX4O60224 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
SSX4O60224 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
SSX4O60224 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC16.58■□□□□ 0.24
SSX4O60224 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC16.58■□□□□ 0.24
SSX4O60224 TUBB8P6-201ENST00000436895 1288 ntBASIC16.58■□□□□ 0.24
SSX4O60224 YBX1P10-201ENST00000444752 975 ntBASIC16.58■□□□□ 0.24
SSX4O60224 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
SSX4O60224 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC16.58■□□□□ 0.24
SSX4O60224 RMI2-205ENST00000576027 818 ntTSL 2 BASIC16.58■□□□□ 0.24
SSX4O60224 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
SSX4O60224 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC16.58■□□□□ 0.24
SSX4O60224 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC16.58■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 21.8 ms