Protein–RNA interactions for Protein: O43353

RIPK2, Receptor-interacting serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK2O43353 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
RIPK2O43353 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
RIPK2O43353 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RIPK2O43353 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC18.6■□□□□ 0.57
RIPK2O43353 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RIPK2O43353 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RIPK2O43353 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RIPK2O43353 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC18.6■□□□□ 0.57
RIPK2O43353 AC093010.1-201ENST00000473625 1624 ntBASIC18.6■□□□□ 0.57
RIPK2O43353 TBC1D3P2-202ENST00000577902 1649 ntBASIC18.6■□□□□ 0.57
RIPK2O43353 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
RIPK2O43353 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC18.59■□□□□ 0.57
RIPK2O43353 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC18.59■□□□□ 0.57
RIPK2O43353 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
RIPK2O43353 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RIPK2O43353 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RIPK2O43353 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RIPK2O43353 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
RIPK2O43353 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC18.59■□□□□ 0.57
RIPK2O43353 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
RIPK2O43353 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RIPK2O43353 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC18.59■□□□□ 0.57
RIPK2O43353 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
RIPK2O43353 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RIPK2O43353 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
RIPK2O43353 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RIPK2O43353 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RIPK2O43353 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC18.59■□□□□ 0.57
RIPK2O43353 GAS7-202ENST00000396115 929 ntTSL 5 BASIC18.59■□□□□ 0.57
RIPK2O43353 LY6E-205ENST00000519611 635 ntTSL 3 BASIC18.59■□□□□ 0.57
RIPK2O43353 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC18.59■□□□□ 0.57
RIPK2O43353 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC18.59■□□□□ 0.57
RIPK2O43353 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC18.59■□□□□ 0.57
RIPK2O43353 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
RIPK2O43353 AC011298.2-201ENST00000617989 482 ntBASIC18.59■□□□□ 0.57
RIPK2O43353 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC18.59■□□□□ 0.57
RIPK2O43353 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
RIPK2O43353 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
RIPK2O43353 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RIPK2O43353 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RIPK2O43353 BCL2-203ENST00000589955 5011 ntBASIC18.59■□□□□ 0.57
RIPK2O43353 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RIPK2O43353 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
RIPK2O43353 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RIPK2O43353 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
RIPK2O43353 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RIPK2O43353 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC18.59■□□□□ 0.57
RIPK2O43353 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RIPK2O43353 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
RIPK2O43353 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
RIPK2O43353 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.57
RIPK2O43353 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC18.58■□□□□ 0.57
RIPK2O43353 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC18.58■□□□□ 0.57
RIPK2O43353 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
RIPK2O43353 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC18.58■□□□□ 0.57
RIPK2O43353 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC18.58■□□□□ 0.57
RIPK2O43353 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.57
RIPK2O43353 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
RIPK2O43353 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
RIPK2O43353 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
RIPK2O43353 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
RIPK2O43353 AL023284.2-201ENST00000405850 579 ntBASIC18.58■□□□□ 0.56
RIPK2O43353 ELP6-205ENST00000439305 880 ntTSL 2 BASIC18.58■□□□□ 0.56
RIPK2O43353 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC18.58■□□□□ 0.56
RIPK2O43353 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC18.58■□□□□ 0.56
RIPK2O43353 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
RIPK2O43353 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
RIPK2O43353 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC18.58■□□□□ 0.56
RIPK2O43353 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
RIPK2O43353 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
RIPK2O43353 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
RIPK2O43353 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC18.58■□□□□ 0.56
RIPK2O43353 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC18.58■□□□□ 0.56
RIPK2O43353 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
RIPK2O43353 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
RIPK2O43353 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
RIPK2O43353 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
RIPK2O43353 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
RIPK2O43353 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
RIPK2O43353 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC18.57■□□□□ 0.56
RIPK2O43353 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC18.57■□□□□ 0.56
RIPK2O43353 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC18.57■□□□□ 0.56
RIPK2O43353 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
RIPK2O43353 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
RIPK2O43353 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
RIPK2O43353 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
RIPK2O43353 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC18.57■□□□□ 0.56
RIPK2O43353 UROS-202ENST00000368778 1556 ntTSL 2 BASIC18.57■□□□□ 0.56
RIPK2O43353 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
RIPK2O43353 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
RIPK2O43353 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC18.57■□□□□ 0.56
RIPK2O43353 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC18.57■□□□□ 0.56
RIPK2O43353 KSR1P1-201ENST00000446298 240 ntBASIC18.57■□□□□ 0.56
RIPK2O43353 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC18.57■□□□□ 0.56
RIPK2O43353 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC18.57■□□□□ 0.56
RIPK2O43353 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC18.57■□□□□ 0.56
RIPK2O43353 AL353708.3-201ENST00000610272 989 ntBASIC18.57■□□□□ 0.56
RIPK2O43353 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
RIPK2O43353 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
RIPK2O43353 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC18.57■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 18.3 ms