Protein–RNA interactions for Protein: O14617

AP3D1, AP-3 complex subunit delta-1, humanhuman

Predictions only

Length 1,153 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3D1O14617 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC17.13■□□□□ 0.33
AP3D1O14617 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
AP3D1O14617 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
AP3D1O14617 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC17.13■□□□□ 0.33
AP3D1O14617 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC17.13■□□□□ 0.33
AP3D1O14617 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC17.13■□□□□ 0.33
AP3D1O14617 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
AP3D1O14617 DHDH-203ENST00000522614 776 ntTSL 5 BASIC17.13■□□□□ 0.33
AP3D1O14617 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC17.13■□□□□ 0.33
AP3D1O14617 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC17.13■□□□□ 0.33
AP3D1O14617 CYGB-204ENST00000589342 815 ntTSL 3 BASIC17.13■□□□□ 0.33
AP3D1O14617 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
AP3D1O14617 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC17.13■□□□□ 0.33
AP3D1O14617 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC17.13■□□□□ 0.33
AP3D1O14617 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
AP3D1O14617 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
AP3D1O14617 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
AP3D1O14617 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
AP3D1O14617 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
AP3D1O14617 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC17.13■□□□□ 0.33
AP3D1O14617 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
AP3D1O14617 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
AP3D1O14617 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
AP3D1O14617 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC17.12■□□□□ 0.33
AP3D1O14617 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC17.12■□□□□ 0.33
AP3D1O14617 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC17.12■□□□□ 0.33
AP3D1O14617 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
AP3D1O14617 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
AP3D1O14617 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC17.12■□□□□ 0.33
AP3D1O14617 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
AP3D1O14617 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
AP3D1O14617 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
AP3D1O14617 ENSA-205ENST00000361532 792 ntTSL 2 BASIC17.12■□□□□ 0.33
AP3D1O14617 BUB3-202ENST00000368859 667 ntTSL 3 BASIC17.12■□□□□ 0.33
AP3D1O14617 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC17.12■□□□□ 0.33
AP3D1O14617 PRR31-201ENST00000371629 978 ntTSL 2 BASIC17.12■□□□□ 0.33
AP3D1O14617 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
AP3D1O14617 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
AP3D1O14617 DET1-205ENST00000558413 583 ntTSL 4 BASIC17.12■□□□□ 0.33
AP3D1O14617 MIR4785-201ENST00000585005 73 ntBASIC17.12■□□□□ 0.33
AP3D1O14617 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC17.12■□□□□ 0.33
AP3D1O14617 AP000525.1-201ENST00000608286 694 ntBASIC17.12■□□□□ 0.33
AP3D1O14617 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
AP3D1O14617 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC17.12■□□□□ 0.33
AP3D1O14617 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
AP3D1O14617 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
AP3D1O14617 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
AP3D1O14617 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC17.12■□□□□ 0.33
AP3D1O14617 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
AP3D1O14617 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
AP3D1O14617 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
AP3D1O14617 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
AP3D1O14617 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
AP3D1O14617 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
AP3D1O14617 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
AP3D1O14617 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
AP3D1O14617 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC17.12■□□□□ 0.33
AP3D1O14617 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
AP3D1O14617 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
AP3D1O14617 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
AP3D1O14617 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
AP3D1O14617 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
AP3D1O14617 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
AP3D1O14617 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC17.11■□□□□ 0.33
AP3D1O14617 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
AP3D1O14617 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC17.11■□□□□ 0.33
AP3D1O14617 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
AP3D1O14617 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
AP3D1O14617 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
AP3D1O14617 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
AP3D1O14617 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
AP3D1O14617 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
AP3D1O14617 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
AP3D1O14617 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
AP3D1O14617 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
AP3D1O14617 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
AP3D1O14617 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
AP3D1O14617 AL390955.1-201ENST00000428694 934 ntBASIC17.11■□□□□ 0.33
AP3D1O14617 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC17.11■□□□□ 0.33
AP3D1O14617 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
AP3D1O14617 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC17.11■□□□□ 0.33
AP3D1O14617 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC17.11■□□□□ 0.33
AP3D1O14617 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
AP3D1O14617 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
AP3D1O14617 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC17.11■□□□□ 0.33
AP3D1O14617 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
AP3D1O14617 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
AP3D1O14617 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
AP3D1O14617 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
AP3D1O14617 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC17.11■□□□□ 0.33
AP3D1O14617 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC17.11■□□□□ 0.33
AP3D1O14617 AC008556.1-201ENST00000610908 2040 ntBASIC17.11■□□□□ 0.33
AP3D1O14617 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
AP3D1O14617 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC17.11■□□□□ 0.33
AP3D1O14617 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
AP3D1O14617 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
AP3D1O14617 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
AP3D1O14617 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
AP3D1O14617 GPAT2P1-201ENST00000444924 1672 ntBASIC17.1■□□□□ 0.33
AP3D1O14617 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 43.5 ms