Protein–RNA interactions for Protein: O00560

SDCBP, Syntenin-1, humanhuman

Predicted RBP Predictions only

Length 298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBPO00560 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC15.59■□□□□ 0.09
SDCBPO00560 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC15.59■□□□□ 0.09
SDCBPO00560 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
SDCBPO00560 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC15.59■□□□□ 0.09
SDCBPO00560 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
SDCBPO00560 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
SDCBPO00560 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
SDCBPO00560 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
SDCBPO00560 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC15.59■□□□□ 0.09
SDCBPO00560 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
SDCBPO00560 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
SDCBPO00560 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
SDCBPO00560 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
SDCBPO00560 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC15.59■□□□□ 0.09
SDCBPO00560 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC15.59■□□□□ 0.09
SDCBPO00560 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
SDCBPO00560 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
SDCBPO00560 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
SDCBPO00560 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC15.59■□□□□ 0.09
SDCBPO00560 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
SDCBPO00560 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
SDCBPO00560 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
SDCBPO00560 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC15.59■□□□□ 0.09
SDCBPO00560 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
SDCBPO00560 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
SDCBPO00560 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.09
SDCBPO00560 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC15.58■□□□□ 0.09
SDCBPO00560 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
SDCBPO00560 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
SDCBPO00560 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC15.58■□□□□ 0.08
SDCBPO00560 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
SDCBPO00560 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
SDCBPO00560 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
SDCBPO00560 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC15.58■□□□□ 0.08
SDCBPO00560 FAM197Y1-201ENST00000421178 764 ntBASIC15.58■□□□□ 0.08
SDCBPO00560 FAM207BP-201ENST00000447172 505 ntBASIC15.58■□□□□ 0.08
SDCBPO00560 AC098590.1-201ENST00000468126 897 ntBASIC15.58■□□□□ 0.08
SDCBPO00560 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC15.58■□□□□ 0.08
SDCBPO00560 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
SDCBPO00560 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
SDCBPO00560 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC15.58■□□□□ 0.08
SDCBPO00560 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC15.58■□□□□ 0.08
SDCBPO00560 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
SDCBPO00560 MIR6786-201ENST00000616843 113 ntBASIC15.58■□□□□ 0.08
SDCBPO00560 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC15.58■□□□□ 0.08
SDCBPO00560 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC15.58■□□□□ 0.08
SDCBPO00560 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
SDCBPO00560 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC15.58■□□□□ 0.08
SDCBPO00560 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
SDCBPO00560 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
SDCBPO00560 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
SDCBPO00560 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
SDCBPO00560 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
SDCBPO00560 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
SDCBPO00560 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
SDCBPO00560 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC15.58■□□□□ 0.08
SDCBPO00560 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
SDCBPO00560 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC15.58■□□□□ 0.08
SDCBPO00560 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC15.58■□□□□ 0.08
SDCBPO00560 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.08
SDCBPO00560 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC15.57■□□□□ 0.08
SDCBPO00560 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
SDCBPO00560 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
SDCBPO00560 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
SDCBPO00560 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
SDCBPO00560 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
SDCBPO00560 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
SDCBPO00560 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC15.57■□□□□ 0.08
SDCBPO00560 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC15.57■□□□□ 0.08
SDCBPO00560 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
SDCBPO00560 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
SDCBPO00560 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
SDCBPO00560 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC15.57■□□□□ 0.08
SDCBPO00560 SAPCD2P4-201ENST00000424595 1171 ntBASIC15.57■□□□□ 0.08
SDCBPO00560 UBE2SP1-201ENST00000450587 669 ntBASIC15.57■□□□□ 0.08
SDCBPO00560 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC15.57■□□□□ 0.08
SDCBPO00560 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC15.57■□□□□ 0.08
SDCBPO00560 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC15.57■□□□□ 0.08
SDCBPO00560 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC15.57■□□□□ 0.08
SDCBPO00560 CD177P1-201ENST00000606252 935 ntBASIC15.57■□□□□ 0.08
SDCBPO00560 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC15.57■□□□□ 0.08
SDCBPO00560 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
SDCBPO00560 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
SDCBPO00560 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
SDCBPO00560 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC15.57■□□□□ 0.08
SDCBPO00560 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
SDCBPO00560 FST-202ENST00000396947 2538 ntTSL 5 BASIC15.57■□□□□ 0.08
SDCBPO00560 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
SDCBPO00560 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
SDCBPO00560 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
SDCBPO00560 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
SDCBPO00560 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
SDCBPO00560 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
SDCBPO00560 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC15.57■□□□□ 0.08
SDCBPO00560 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC15.57■□□□□ 0.08
SDCBPO00560 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC15.57■□□□□ 0.08
SDCBPO00560 POR-209ENST00000439269 1858 ntTSL 2 BASIC15.57■□□□□ 0.08
SDCBPO00560 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC15.56■□□□□ 0.08
SDCBPO00560 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
SDCBPO00560 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC15.56■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 58.7 ms