Protein–RNA interactions for Protein: O00299

CLIC1, Chloride intracellular channel protein 1, humanhuman

Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC1O00299 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CLIC1O00299 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
CLIC1O00299 FAM201B-201ENST00000458407 597 ntBASIC17.27■□□□□ 0.36
CLIC1O00299 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC17.27■□□□□ 0.36
CLIC1O00299 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC17.27■□□□□ 0.36
CLIC1O00299 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC17.27■□□□□ 0.36
CLIC1O00299 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC17.27■□□□□ 0.36
CLIC1O00299 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC17.27■□□□□ 0.36
CLIC1O00299 ITM2C-210ENST00000620962 501 ntBASIC17.27■□□□□ 0.36
CLIC1O00299 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
CLIC1O00299 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
CLIC1O00299 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
CLIC1O00299 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC17.27■□□□□ 0.35
CLIC1O00299 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC17.27■□□□□ 0.35
CLIC1O00299 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC17.27■□□□□ 0.35
CLIC1O00299 AC036111.1-201ENST00000533973 1582 ntBASIC17.27■□□□□ 0.35
CLIC1O00299 EML3-212ENST00000494176 2901 ntTSL 2 BASIC17.27■□□□□ 0.35
CLIC1O00299 EML3-216ENST00000529309 2909 ntTSL 2 BASIC17.27■□□□□ 0.35
CLIC1O00299 CYP51A1P1-201ENST00000492267 1507 ntBASIC17.26■□□□□ 0.35
CLIC1O00299 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CLIC1O00299 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CLIC1O00299 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
CLIC1O00299 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CLIC1O00299 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
CLIC1O00299 AC009102.3-201ENST00000623118 1491 ntBASIC17.26■□□□□ 0.35
CLIC1O00299 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CLIC1O00299 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CLIC1O00299 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC17.26■□□□□ 0.35
CLIC1O00299 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC17.26■□□□□ 0.35
CLIC1O00299 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC17.26■□□□□ 0.35
CLIC1O00299 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CLIC1O00299 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CLIC1O00299 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CLIC1O00299 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CLIC1O00299 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
CLIC1O00299 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC17.26■□□□□ 0.35
CLIC1O00299 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC17.26■□□□□ 0.35
CLIC1O00299 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC17.26■□□□□ 0.35
CLIC1O00299 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CLIC1O00299 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
CLIC1O00299 UROS-202ENST00000368778 1556 ntTSL 2 BASIC17.26■□□□□ 0.35
CLIC1O00299 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CLIC1O00299 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CLIC1O00299 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
CLIC1O00299 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
CLIC1O00299 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CLIC1O00299 HLA-DQB1-201ENST00000374943 1656 ntBASIC17.26■□□□□ 0.35
CLIC1O00299 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CLIC1O00299 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CLIC1O00299 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC17.26■□□□□ 0.35
CLIC1O00299 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CLIC1O00299 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC17.25■□□□□ 0.35
CLIC1O00299 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
CLIC1O00299 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CLIC1O00299 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CLIC1O00299 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CLIC1O00299 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC17.25■□□□□ 0.35
CLIC1O00299 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
CLIC1O00299 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC17.25■□□□□ 0.35
CLIC1O00299 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC17.25■□□□□ 0.35
CLIC1O00299 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
CLIC1O00299 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CLIC1O00299 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
CLIC1O00299 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC17.25■□□□□ 0.35
CLIC1O00299 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC17.25■□□□□ 0.35
CLIC1O00299 KRT18P29-201ENST00000397031 1267 ntBASIC17.25■□□□□ 0.35
CLIC1O00299 CRYGFP-201ENST00000418459 633 ntBASIC17.25■□□□□ 0.35
CLIC1O00299 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CLIC1O00299 MNT-208ENST00000575394 606 ntTSL 4 BASIC17.25■□□□□ 0.35
CLIC1O00299 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC17.25■□□□□ 0.35
CLIC1O00299 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC17.25■□□□□ 0.35
CLIC1O00299 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
CLIC1O00299 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
CLIC1O00299 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
CLIC1O00299 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CLIC1O00299 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
CLIC1O00299 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
CLIC1O00299 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
CLIC1O00299 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CLIC1O00299 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CLIC1O00299 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CLIC1O00299 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CLIC1O00299 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CLIC1O00299 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CLIC1O00299 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
CLIC1O00299 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
CLIC1O00299 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
CLIC1O00299 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC17.24■□□□□ 0.35
CLIC1O00299 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC17.24■□□□□ 0.35
CLIC1O00299 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CLIC1O00299 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC17.24■□□□□ 0.35
CLIC1O00299 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CLIC1O00299 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CLIC1O00299 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CLIC1O00299 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
CLIC1O00299 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CLIC1O00299 MIR149-201ENST00000384879 89 ntBASIC17.24■□□□□ 0.35
CLIC1O00299 MIR4674-201ENST00000582457 87 ntBASIC17.24■□□□□ 0.35
CLIC1O00299 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
CLIC1O00299 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC17.24■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms