Protein–RNA interactions for Protein: O00148

DDX39A, ATP-dependent RNA helicase DDX39A, humanhuman

Known RBP Predictions only

Length 427 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39AO00148 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC20.55■□□□□ 0.88
DDX39AO00148 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
DDX39AO00148 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
DDX39AO00148 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
DDX39AO00148 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
DDX39AO00148 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
DDX39AO00148 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
DDX39AO00148 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC20.54■□□□□ 0.88
DDX39AO00148 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
DDX39AO00148 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
DDX39AO00148 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
DDX39AO00148 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC20.54■□□□□ 0.88
DDX39AO00148 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC20.54■□□□□ 0.88
DDX39AO00148 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
DDX39AO00148 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
DDX39AO00148 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC20.54■□□□□ 0.88
DDX39AO00148 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC20.54■□□□□ 0.88
DDX39AO00148 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
DDX39AO00148 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC20.54■□□□□ 0.88
DDX39AO00148 AL353692.3-201ENST00000407031 1396 ntBASIC20.54■□□□□ 0.88
DDX39AO00148 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
DDX39AO00148 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC20.54■□□□□ 0.88
DDX39AO00148 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC20.54■□□□□ 0.88
DDX39AO00148 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
DDX39AO00148 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC20.54■□□□□ 0.88
DDX39AO00148 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
DDX39AO00148 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC20.54■□□□□ 0.88
DDX39AO00148 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
DDX39AO00148 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
DDX39AO00148 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
DDX39AO00148 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC20.53■□□□□ 0.88
DDX39AO00148 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
DDX39AO00148 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
DDX39AO00148 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
DDX39AO00148 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
DDX39AO00148 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
DDX39AO00148 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC20.53■□□□□ 0.88
DDX39AO00148 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC20.53■□□□□ 0.88
DDX39AO00148 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC20.53■□□□□ 0.88
DDX39AO00148 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC20.53■□□□□ 0.88
DDX39AO00148 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC20.53■□□□□ 0.88
DDX39AO00148 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
DDX39AO00148 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC20.53■□□□□ 0.88
DDX39AO00148 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC20.53■□□□□ 0.88
DDX39AO00148 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC20.53■□□□□ 0.88
DDX39AO00148 CLEC4GP1-201ENST00000596555 870 ntBASIC20.53■□□□□ 0.88
DDX39AO00148 IGHV3-41-201ENST00000613121 348 ntBASIC20.53■□□□□ 0.88
DDX39AO00148 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC20.53■□□□□ 0.88
DDX39AO00148 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC20.53■□□□□ 0.88
DDX39AO00148 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
DDX39AO00148 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
DDX39AO00148 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
DDX39AO00148 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
DDX39AO00148 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
DDX39AO00148 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
DDX39AO00148 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC20.53■□□□□ 0.88
DDX39AO00148 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC20.52■□□□□ 0.88
DDX39AO00148 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC20.52■□□□□ 0.88
DDX39AO00148 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC20.52■□□□□ 0.88
DDX39AO00148 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
DDX39AO00148 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
DDX39AO00148 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
DDX39AO00148 IPPK-202ENST00000375522 882 ntTSL 3 BASIC20.52■□□□□ 0.88
DDX39AO00148 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC20.52■□□□□ 0.88
DDX39AO00148 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
DDX39AO00148 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC20.52■□□□□ 0.88
DDX39AO00148 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC20.52■□□□□ 0.88
DDX39AO00148 LINC00265-3P-201ENST00000447588 903 ntBASIC20.52■□□□□ 0.88
DDX39AO00148 IL11-204ENST00000590625 1028 ntTSL 2 BASIC20.52■□□□□ 0.88
DDX39AO00148 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC20.52■□□□□ 0.88
DDX39AO00148 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
DDX39AO00148 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
DDX39AO00148 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC20.52■□□□□ 0.88
DDX39AO00148 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
DDX39AO00148 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
DDX39AO00148 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
DDX39AO00148 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
DDX39AO00148 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
DDX39AO00148 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
DDX39AO00148 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC20.51■□□□□ 0.87
DDX39AO00148 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC20.51■□□□□ 0.87
DDX39AO00148 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
DDX39AO00148 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
DDX39AO00148 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
DDX39AO00148 PPIH-202ENST00000372549 327 ntTSL 3 BASIC20.51■□□□□ 0.87
DDX39AO00148 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
DDX39AO00148 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
DDX39AO00148 TPSP2-201ENST00000561760 610 ntBASIC20.51■□□□□ 0.87
DDX39AO00148 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
DDX39AO00148 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC20.51■□□□□ 0.87
DDX39AO00148 AC124864.1-201ENST00000623408 392 ntBASIC20.51■□□□□ 0.87
DDX39AO00148 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
DDX39AO00148 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
DDX39AO00148 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
DDX39AO00148 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
DDX39AO00148 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
DDX39AO00148 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
DDX39AO00148 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
DDX39AO00148 KRT89P-201ENST00000620027 1478 ntBASIC20.5■□□□□ 0.87
DDX39AO00148 HCG11-201ENST00000411553 5696 ntBASIC20.5■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms