Protein–RNA interactions for Protein: A7E2U8

C4orf47, UPF0602 protein C4orf47, humanhuman

Predictions only

Length 309 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C4orf47A7E2U8 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
C4orf47A7E2U8 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC17.86■□□□□ 0.45
C4orf47A7E2U8 STX6-204ENST00000542060 4809 ntTSL 2 BASIC17.85■□□□□ 0.45
C4orf47A7E2U8 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
C4orf47A7E2U8 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
C4orf47A7E2U8 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
C4orf47A7E2U8 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
C4orf47A7E2U8 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
C4orf47A7E2U8 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
C4orf47A7E2U8 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC17.85■□□□□ 0.45
C4orf47A7E2U8 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
C4orf47A7E2U8 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
C4orf47A7E2U8 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
C4orf47A7E2U8 DDT-203ENST00000403754 569 ntTSL 3 BASIC17.85■□□□□ 0.45
C4orf47A7E2U8 DDT-206ENST00000430101 573 ntTSL 2 BASIC17.85■□□□□ 0.45
C4orf47A7E2U8 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC17.85■□□□□ 0.45
C4orf47A7E2U8 RNA5SP415-201ENST00000517246 115 ntBASIC17.85■□□□□ 0.45
C4orf47A7E2U8 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC17.85■□□□□ 0.45
C4orf47A7E2U8 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
C4orf47A7E2U8 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
C4orf47A7E2U8 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC17.85■□□□□ 0.45
C4orf47A7E2U8 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
C4orf47A7E2U8 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC17.85■□□□□ 0.45
C4orf47A7E2U8 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC17.85■□□□□ 0.45
C4orf47A7E2U8 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
C4orf47A7E2U8 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
C4orf47A7E2U8 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
C4orf47A7E2U8 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
C4orf47A7E2U8 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC17.84■□□□□ 0.45
C4orf47A7E2U8 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
C4orf47A7E2U8 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC17.84■□□□□ 0.45
C4orf47A7E2U8 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
C4orf47A7E2U8 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC17.84■□□□□ 0.45
C4orf47A7E2U8 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
C4orf47A7E2U8 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
C4orf47A7E2U8 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC17.84■□□□□ 0.45
C4orf47A7E2U8 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
C4orf47A7E2U8 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC17.84■□□□□ 0.45
C4orf47A7E2U8 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC17.84■□□□□ 0.45
C4orf47A7E2U8 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC17.84■□□□□ 0.45
C4orf47A7E2U8 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC17.84■□□□□ 0.45
C4orf47A7E2U8 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC17.84■□□□□ 0.45
C4orf47A7E2U8 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC17.84■□□□□ 0.45
C4orf47A7E2U8 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC17.84■□□□□ 0.45
C4orf47A7E2U8 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
C4orf47A7E2U8 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
C4orf47A7E2U8 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
C4orf47A7E2U8 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
C4orf47A7E2U8 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
C4orf47A7E2U8 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC17.83■□□□□ 0.45
C4orf47A7E2U8 AC087289.5-201ENST00000586076 3175 ntBASIC17.83■□□□□ 0.45
C4orf47A7E2U8 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC17.83■□□□□ 0.45
C4orf47A7E2U8 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC17.83■□□□□ 0.45
C4orf47A7E2U8 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.45
C4orf47A7E2U8 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC17.83■□□□□ 0.45
C4orf47A7E2U8 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.45
C4orf47A7E2U8 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
C4orf47A7E2U8 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
C4orf47A7E2U8 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.45
C4orf47A7E2U8 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.45
C4orf47A7E2U8 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
C4orf47A7E2U8 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC17.83■□□□□ 0.44
C4orf47A7E2U8 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
C4orf47A7E2U8 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC17.83■□□□□ 0.44
C4orf47A7E2U8 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
C4orf47A7E2U8 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
C4orf47A7E2U8 PMP22-202ENST00000395936 816 ntTSL 3 BASIC17.83■□□□□ 0.44
C4orf47A7E2U8 LBH-203ENST00000404397 543 ntTSL 4 BASIC17.83■□□□□ 0.44
C4orf47A7E2U8 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
C4orf47A7E2U8 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC17.83■□□□□ 0.44
C4orf47A7E2U8 OR7E14P-202ENST00000530490 1290 ntBASIC17.83■□□□□ 0.44
C4orf47A7E2U8 SART3-203ENST00000546611 1184 ntBASIC17.83■□□□□ 0.44
C4orf47A7E2U8 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC17.83■□□□□ 0.44
C4orf47A7E2U8 AC012640.2-201ENST00000561606 901 ntBASIC17.83■□□□□ 0.44
C4orf47A7E2U8 AC005336.2-201ENST00000593183 939 ntBASIC17.83■□□□□ 0.44
C4orf47A7E2U8 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
C4orf47A7E2U8 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
C4orf47A7E2U8 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
C4orf47A7E2U8 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
C4orf47A7E2U8 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
C4orf47A7E2U8 TEX21P-204ENST00000641479 1693 ntBASIC17.83■□□□□ 0.44
C4orf47A7E2U8 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
C4orf47A7E2U8 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
C4orf47A7E2U8 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC17.82■□□□□ 0.44
C4orf47A7E2U8 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
C4orf47A7E2U8 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC17.82■□□□□ 0.44
C4orf47A7E2U8 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
C4orf47A7E2U8 AC112777.1-201ENST00000540175 1423 ntBASIC17.82■□□□□ 0.44
C4orf47A7E2U8 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC17.82■□□□□ 0.44
C4orf47A7E2U8 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
C4orf47A7E2U8 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC17.82■□□□□ 0.44
C4orf47A7E2U8 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
C4orf47A7E2U8 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
C4orf47A7E2U8 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
C4orf47A7E2U8 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
C4orf47A7E2U8 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
C4orf47A7E2U8 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
C4orf47A7E2U8 DNAJB3-202ENST00000449667 1266 ntBASIC17.82■□□□□ 0.44
C4orf47A7E2U8 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC17.82■□□□□ 0.44
C4orf47A7E2U8 ANKRD20A8P-203ENST00000641373 517 ntBASIC17.82■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms