Protein–RNA interactions for Protein: A6NMK7

CPSF4L, Putative cleavage and polyadenylation specificity factor subunit 4-like protein, humanhuman

Known RBP Predictions only

Length 179 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4LA6NMK7 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CPSF4LA6NMK7 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CPSF4LA6NMK7 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CPSF4LA6NMK7 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CPSF4LA6NMK7 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
CPSF4LA6NMK7 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CPSF4LA6NMK7 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
CPSF4LA6NMK7 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CPSF4LA6NMK7 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC16.91■□□□□ 0.3
CPSF4LA6NMK7 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
CPSF4LA6NMK7 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC16.9■□□□□ 0.3
CPSF4LA6NMK7 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC16.9■□□□□ 0.3
CPSF4LA6NMK7 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC16.9■□□□□ 0.3
CPSF4LA6NMK7 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CPSF4LA6NMK7 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CPSF4LA6NMK7 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC16.9■□□□□ 0.3
CPSF4LA6NMK7 GMCL1P1-201ENST00000463439 1581 ntBASIC16.9■□□□□ 0.3
CPSF4LA6NMK7 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CPSF4LA6NMK7 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
CPSF4LA6NMK7 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC16.9■□□□□ 0.3
CPSF4LA6NMK7 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
CPSF4LA6NMK7 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CPSF4LA6NMK7 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CPSF4LA6NMK7 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC16.9■□□□□ 0.3
CPSF4LA6NMK7 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CPSF4LA6NMK7 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC16.9■□□□□ 0.3
CPSF4LA6NMK7 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CPSF4LA6NMK7 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC16.9■□□□□ 0.3
CPSF4LA6NMK7 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC16.9■□□□□ 0.3
CPSF4LA6NMK7 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC16.9■□□□□ 0.3
CPSF4LA6NMK7 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC16.9■□□□□ 0.3
CPSF4LA6NMK7 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CPSF4LA6NMK7 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CPSF4LA6NMK7 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC16.9■□□□□ 0.3
CPSF4LA6NMK7 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
CPSF4LA6NMK7 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC16.9■□□□□ 0.3
CPSF4LA6NMK7 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CPSF4LA6NMK7 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CPSF4LA6NMK7 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CPSF4LA6NMK7 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC16.9■□□□□ 0.3
CPSF4LA6NMK7 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
CPSF4LA6NMK7 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
CPSF4LA6NMK7 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC16.89■□□□□ 0.3
CPSF4LA6NMK7 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC16.89■□□□□ 0.3
CPSF4LA6NMK7 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
CPSF4LA6NMK7 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
CPSF4LA6NMK7 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
CPSF4LA6NMK7 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CPSF4LA6NMK7 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CPSF4LA6NMK7 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CPSF4LA6NMK7 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CPSF4LA6NMK7 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CPSF4LA6NMK7 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC16.89■□□□□ 0.29
CPSF4LA6NMK7 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CPSF4LA6NMK7 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CPSF4LA6NMK7 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
CPSF4LA6NMK7 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
CPSF4LA6NMK7 SNCG-201ENST00000348795 684 ntTSL 2 BASIC16.89■□□□□ 0.29
CPSF4LA6NMK7 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC16.89■□□□□ 0.29
CPSF4LA6NMK7 MDFI-202ENST00000373050 809 ntTSL 2 BASIC16.89■□□□□ 0.29
CPSF4LA6NMK7 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CPSF4LA6NMK7 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC16.89■□□□□ 0.29
CPSF4LA6NMK7 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
CPSF4LA6NMK7 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC16.89■□□□□ 0.29
CPSF4LA6NMK7 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC16.89■□□□□ 0.29
CPSF4LA6NMK7 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC16.89■□□□□ 0.29
CPSF4LA6NMK7 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC16.89■□□□□ 0.29
CPSF4LA6NMK7 Z99916.2-201ENST00000604037 246 ntBASIC16.89■□□□□ 0.29
CPSF4LA6NMK7 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC16.89■□□□□ 0.29
CPSF4LA6NMK7 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CPSF4LA6NMK7 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CPSF4LA6NMK7 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC16.89■□□□□ 0.29
CPSF4LA6NMK7 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
CPSF4LA6NMK7 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
CPSF4LA6NMK7 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CPSF4LA6NMK7 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CPSF4LA6NMK7 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CPSF4LA6NMK7 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
CPSF4LA6NMK7 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CPSF4LA6NMK7 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CPSF4LA6NMK7 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CPSF4LA6NMK7 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CPSF4LA6NMK7 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
CPSF4LA6NMK7 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC16.88■□□□□ 0.29
CPSF4LA6NMK7 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC16.88■□□□□ 0.29
CPSF4LA6NMK7 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CPSF4LA6NMK7 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
CPSF4LA6NMK7 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
CPSF4LA6NMK7 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
CPSF4LA6NMK7 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
CPSF4LA6NMK7 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CPSF4LA6NMK7 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
CPSF4LA6NMK7 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CPSF4LA6NMK7 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CPSF4LA6NMK7 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC16.88■□□□□ 0.29
CPSF4LA6NMK7 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC16.88■□□□□ 0.29
CPSF4LA6NMK7 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CPSF4LA6NMK7 AP003071.4-201ENST00000562276 1284 ntBASIC16.88■□□□□ 0.29
CPSF4LA6NMK7 USP36-216ENST00000589424 970 ntTSL 5 BASIC16.88■□□□□ 0.29
CPSF4LA6NMK7 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms