Protein–RNA interactions for Protein: A6NKD9

CCDC85C, Coiled-coil domain-containing protein 85C, humanhuman

Predictions only

Length 419 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC85CA6NKD9 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC20.15■□□□□ 0.82
CCDC85CA6NKD9 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.82
CCDC85CA6NKD9 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
CCDC85CA6NKD9 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CCDC85CA6NKD9 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CCDC85CA6NKD9 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
CCDC85CA6NKD9 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
CCDC85CA6NKD9 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
CCDC85CA6NKD9 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC20.14■□□□□ 0.81
CCDC85CA6NKD9 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
CCDC85CA6NKD9 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC20.14■□□□□ 0.81
CCDC85CA6NKD9 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC20.14■□□□□ 0.81
CCDC85CA6NKD9 KLF2P3-201ENST00000451977 1087 ntBASIC20.14■□□□□ 0.81
CCDC85CA6NKD9 IGHV3-65-201ENST00000523210 341 ntBASIC20.14■□□□□ 0.81
CCDC85CA6NKD9 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC20.14■□□□□ 0.81
CCDC85CA6NKD9 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC20.14■□□□□ 0.81
CCDC85CA6NKD9 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC20.14■□□□□ 0.81
CCDC85CA6NKD9 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
CCDC85CA6NKD9 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC20.14■□□□□ 0.81
CCDC85CA6NKD9 AC017083.2-201ENST00000608069 979 ntBASIC20.14■□□□□ 0.81
CCDC85CA6NKD9 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
CCDC85CA6NKD9 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CCDC85CA6NKD9 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC20.14■□□□□ 0.81
CCDC85CA6NKD9 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CCDC85CA6NKD9 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CCDC85CA6NKD9 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC20.13■□□□□ 0.81
CCDC85CA6NKD9 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
CCDC85CA6NKD9 FO538757.1-201ENST00000623083 1397 ntBASIC20.13■□□□□ 0.81
CCDC85CA6NKD9 REM2-202ENST00000536884 1331 ntTSL 2 BASIC20.13■□□□□ 0.81
CCDC85CA6NKD9 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC20.13■□□□□ 0.81
CCDC85CA6NKD9 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CCDC85CA6NKD9 CD9-202ENST00000382515 1229 ntTSL 5 BASIC20.13■□□□□ 0.81
CCDC85CA6NKD9 AL627223.1-201ENST00000416693 442 ntBASIC20.13■□□□□ 0.81
CCDC85CA6NKD9 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC20.13■□□□□ 0.81
CCDC85CA6NKD9 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC20.13■□□□□ 0.81
CCDC85CA6NKD9 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC20.13■□□□□ 0.81
CCDC85CA6NKD9 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
CCDC85CA6NKD9 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
CCDC85CA6NKD9 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC20.13■□□□□ 0.81
CCDC85CA6NKD9 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC20.13■□□□□ 0.81
CCDC85CA6NKD9 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
CCDC85CA6NKD9 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC20.12■□□□□ 0.81
CCDC85CA6NKD9 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC20.12■□□□□ 0.81
CCDC85CA6NKD9 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
CCDC85CA6NKD9 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
CCDC85CA6NKD9 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CCDC85CA6NKD9 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC20.12■□□□□ 0.81
CCDC85CA6NKD9 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CCDC85CA6NKD9 BSG-215ENST00000618006 1329 ntTSL 2 BASIC20.12■□□□□ 0.81
CCDC85CA6NKD9 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC20.12■□□□□ 0.81
CCDC85CA6NKD9 PIN1P1-201ENST00000412108 996 ntBASIC20.12■□□□□ 0.81
CCDC85CA6NKD9 AC107890.1-201ENST00000422478 521 ntBASIC20.12■□□□□ 0.81
CCDC85CA6NKD9 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC20.12■□□□□ 0.81
CCDC85CA6NKD9 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC20.12■□□□□ 0.81
CCDC85CA6NKD9 AP003385.5-201ENST00000533876 555 ntTSL 4 BASIC20.12■□□□□ 0.81
CCDC85CA6NKD9 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC20.12■□□□□ 0.81
CCDC85CA6NKD9 COQ9-214ENST00000567933 882 ntTSL 3 BASIC20.12■□□□□ 0.81
CCDC85CA6NKD9 AC008667.4-201ENST00000607370 168 ntBASIC20.12■□□□□ 0.81
CCDC85CA6NKD9 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
CCDC85CA6NKD9 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CCDC85CA6NKD9 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
CCDC85CA6NKD9 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC20.12■□□□□ 0.81
CCDC85CA6NKD9 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC20.11■□□□□ 0.81
CCDC85CA6NKD9 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC20.11■□□□□ 0.81
CCDC85CA6NKD9 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
CCDC85CA6NKD9 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
CCDC85CA6NKD9 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CCDC85CA6NKD9 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CCDC85CA6NKD9 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC20.11■□□□□ 0.81
CCDC85CA6NKD9 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
CCDC85CA6NKD9 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CCDC85CA6NKD9 NME6-203ENST00000415644 849 ntTSL 2 BASIC20.11■□□□□ 0.81
CCDC85CA6NKD9 PRYP5-201ENST00000451909 266 ntBASIC20.11■□□□□ 0.81
CCDC85CA6NKD9 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC20.11■□□□□ 0.81
CCDC85CA6NKD9 AC092658.1-201ENST00000505836 891 ntBASIC20.11■□□□□ 0.81
CCDC85CA6NKD9 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC20.11■□□□□ 0.81
CCDC85CA6NKD9 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC20.11■□□□□ 0.81
CCDC85CA6NKD9 FAM192A-212ENST00000566077 1066 ntTSL 3 BASIC20.11■□□□□ 0.81
CCDC85CA6NKD9 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC20.11■□□□□ 0.81
CCDC85CA6NKD9 AC004706.3-202ENST00000621574 984 ntBASIC20.11■□□□□ 0.81
CCDC85CA6NKD9 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC20.11■□□□□ 0.81
CCDC85CA6NKD9 RETN-203ENST00000629642 400 ntTSL 5 BASIC20.11■□□□□ 0.81
CCDC85CA6NKD9 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
CCDC85CA6NKD9 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CCDC85CA6NKD9 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CCDC85CA6NKD9 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC20.11■□□□□ 0.81
CCDC85CA6NKD9 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
CCDC85CA6NKD9 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
CCDC85CA6NKD9 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC20.11■□□□□ 0.81
CCDC85CA6NKD9 AL357033.4-201ENST00000617703 1807 ntBASIC20.11■□□□□ 0.81
CCDC85CA6NKD9 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CCDC85CA6NKD9 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC20.11■□□□□ 0.81
CCDC85CA6NKD9 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
CCDC85CA6NKD9 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC20.11■□□□□ 0.81
CCDC85CA6NKD9 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC20.1■□□□□ 0.81
CCDC85CA6NKD9 CU639417.3-201ENST00000624240 1404 ntBASIC20.1■□□□□ 0.81
CCDC85CA6NKD9 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC20.1■□□□□ 0.81
CCDC85CA6NKD9 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
CCDC85CA6NKD9 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC20.1■□□□□ 0.81
CCDC85CA6NKD9 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms