Protein–RNA interactions for Protein: A6NER0

TBC1D3F, TBC1 domain family member 3F, humanhuman

Predicted RBP Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3FA6NER0 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TBC1D3FA6NER0 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TBC1D3FA6NER0 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TBC1D3FA6NER0 DDT-203ENST00000403754 569 ntTSL 3 BASIC18.19■□□□□ 0.5
TBC1D3FA6NER0 DDT-206ENST00000430101 573 ntTSL 2 BASIC18.19■□□□□ 0.5
TBC1D3FA6NER0 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC18.19■□□□□ 0.5
TBC1D3FA6NER0 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC18.19■□□□□ 0.5
TBC1D3FA6NER0 AC091607.1-201ENST00000490318 1060 ntBASIC18.19■□□□□ 0.5
TBC1D3FA6NER0 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
TBC1D3FA6NER0 AC113404.2-201ENST00000507884 177 ntBASIC18.19■□□□□ 0.5
TBC1D3FA6NER0 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC18.19■□□□□ 0.5
TBC1D3FA6NER0 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC18.19■□□□□ 0.5
TBC1D3FA6NER0 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC18.19■□□□□ 0.5
TBC1D3FA6NER0 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TBC1D3FA6NER0 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
TBC1D3FA6NER0 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
TBC1D3FA6NER0 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC18.19■□□□□ 0.5
TBC1D3FA6NER0 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TBC1D3FA6NER0 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
TBC1D3FA6NER0 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
TBC1D3FA6NER0 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
TBC1D3FA6NER0 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
TBC1D3FA6NER0 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
TBC1D3FA6NER0 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC18.18■□□□□ 0.5
TBC1D3FA6NER0 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TBC1D3FA6NER0 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
TBC1D3FA6NER0 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TBC1D3FA6NER0 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
TBC1D3FA6NER0 KRT8P10-201ENST00000450021 1447 ntBASIC18.18■□□□□ 0.5
TBC1D3FA6NER0 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TBC1D3FA6NER0 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TBC1D3FA6NER0 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TBC1D3FA6NER0 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
TBC1D3FA6NER0 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
TBC1D3FA6NER0 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TBC1D3FA6NER0 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
TBC1D3FA6NER0 TSPY12P-201ENST00000421279 868 ntBASIC18.18■□□□□ 0.5
TBC1D3FA6NER0 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC18.18■□□□□ 0.5
TBC1D3FA6NER0 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC18.18■□□□□ 0.5
TBC1D3FA6NER0 AP005901.3-202ENST00000581653 237 ntBASIC18.18■□□□□ 0.5
TBC1D3FA6NER0 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC18.18■□□□□ 0.5
TBC1D3FA6NER0 GXYLT1P4-201ENST00000613576 1192 ntBASIC18.18■□□□□ 0.5
TBC1D3FA6NER0 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
TBC1D3FA6NER0 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
TBC1D3FA6NER0 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TBC1D3FA6NER0 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC18.18■□□□□ 0.5
TBC1D3FA6NER0 ADK-206ENST00000541550 2222 ntTSL 2 BASIC18.18■□□□□ 0.5
TBC1D3FA6NER0 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC18.18■□□□□ 0.5
TBC1D3FA6NER0 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC18.18■□□□□ 0.5
TBC1D3FA6NER0 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
TBC1D3FA6NER0 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC18.17■□□□□ 0.5
TBC1D3FA6NER0 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TBC1D3FA6NER0 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC18.17■□□□□ 0.5
TBC1D3FA6NER0 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
TBC1D3FA6NER0 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
TBC1D3FA6NER0 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
TBC1D3FA6NER0 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
TBC1D3FA6NER0 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TBC1D3FA6NER0 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TBC1D3FA6NER0 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC18.17■□□□□ 0.5
TBC1D3FA6NER0 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
TBC1D3FA6NER0 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TBC1D3FA6NER0 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC18.17■□□□□ 0.5
TBC1D3FA6NER0 NUS1P2-201ENST00000417358 873 ntBASIC18.17■□□□□ 0.5
TBC1D3FA6NER0 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
TBC1D3FA6NER0 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC18.17■□□□□ 0.5
TBC1D3FA6NER0 FDX1P1-201ENST00000449115 551 ntBASIC18.17■□□□□ 0.5
TBC1D3FA6NER0 KRT16P4-201ENST00000453883 522 ntBASIC18.17■□□□□ 0.5
TBC1D3FA6NER0 BET1L-206ENST00000486280 665 ntTSL 3 BASIC18.17■□□□□ 0.5
TBC1D3FA6NER0 FICD-205ENST00000552758 603 ntTSL 2 BASIC18.17■□□□□ 0.5
TBC1D3FA6NER0 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC18.17■□□□□ 0.5
TBC1D3FA6NER0 ANKRD20A8P-203ENST00000641373 517 ntBASIC18.17■□□□□ 0.5
TBC1D3FA6NER0 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC18.17■□□□□ 0.5
TBC1D3FA6NER0 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
TBC1D3FA6NER0 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC18.17■□□□□ 0.5
TBC1D3FA6NER0 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TBC1D3FA6NER0 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC18.17■□□□□ 0.5
TBC1D3FA6NER0 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TBC1D3FA6NER0 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TBC1D3FA6NER0 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
TBC1D3FA6NER0 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TBC1D3FA6NER0 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
TBC1D3FA6NER0 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TBC1D3FA6NER0 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TBC1D3FA6NER0 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TBC1D3FA6NER0 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC18.17■□□□□ 0.5
TBC1D3FA6NER0 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
TBC1D3FA6NER0 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TBC1D3FA6NER0 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TBC1D3FA6NER0 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TBC1D3FA6NER0 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC18.16■□□□□ 0.5
TBC1D3FA6NER0 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TBC1D3FA6NER0 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
TBC1D3FA6NER0 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TBC1D3FA6NER0 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC18.16■□□□□ 0.5
TBC1D3FA6NER0 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TBC1D3FA6NER0 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC18.16■□□□□ 0.5
TBC1D3FA6NER0 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC18.16■□□□□ 0.5
TBC1D3FA6NER0 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC18.16■□□□□ 0.5
TBC1D3FA6NER0 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 53 ms