Protein–RNA interactions for Protein: A0PJX4

SHISA3, Protein shisa-3 homolog, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3A0PJX4 POM121L13P-201ENST00000422362 380 ntBASIC15.96■□□□□ 0.15
SHISA3A0PJX4 UNC93B4-201ENST00000505679 747 ntBASIC15.96■□□□□ 0.15
SHISA3A0PJX4 MIR4758-201ENST00000577688 71 ntBASIC15.96■□□□□ 0.15
SHISA3A0PJX4 AC004264.1-201ENST00000608354 794 ntBASIC15.96■□□□□ 0.15
SHISA3A0PJX4 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
SHISA3A0PJX4 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC15.96■□□□□ 0.15
SHISA3A0PJX4 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC15.96■□□□□ 0.15
SHISA3A0PJX4 AL121761.2-201ENST00000598007 1648 ntBASIC15.96■□□□□ 0.15
SHISA3A0PJX4 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC15.96■□□□□ 0.15
SHISA3A0PJX4 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC15.96■□□□□ 0.15
SHISA3A0PJX4 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
SHISA3A0PJX4 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
SHISA3A0PJX4 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.14
SHISA3A0PJX4 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
SHISA3A0PJX4 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
SHISA3A0PJX4 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC15.96■□□□□ 0.14
SHISA3A0PJX4 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC15.96■□□□□ 0.14
SHISA3A0PJX4 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.14
SHISA3A0PJX4 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC15.95■□□□□ 0.14
SHISA3A0PJX4 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC15.95■□□□□ 0.14
SHISA3A0PJX4 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
SHISA3A0PJX4 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
SHISA3A0PJX4 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
SHISA3A0PJX4 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
SHISA3A0PJX4 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
SHISA3A0PJX4 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
SHISA3A0PJX4 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
SHISA3A0PJX4 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
SHISA3A0PJX4 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
SHISA3A0PJX4 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
SHISA3A0PJX4 AC093010.1-201ENST00000473625 1624 ntBASIC15.95■□□□□ 0.14
SHISA3A0PJX4 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC15.95■□□□□ 0.14
SHISA3A0PJX4 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
SHISA3A0PJX4 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC15.95■□□□□ 0.14
SHISA3A0PJX4 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC15.95■□□□□ 0.14
SHISA3A0PJX4 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC15.95■□□□□ 0.14
SHISA3A0PJX4 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC15.95■□□□□ 0.14
SHISA3A0PJX4 TSPY6P-201ENST00000448518 926 ntBASIC15.95■□□□□ 0.14
SHISA3A0PJX4 AC091390.4-202ENST00000476426 537 ntBASIC15.95■□□□□ 0.14
SHISA3A0PJX4 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC15.95■□□□□ 0.14
SHISA3A0PJX4 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC15.95■□□□□ 0.14
SHISA3A0PJX4 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC15.95■□□□□ 0.14
SHISA3A0PJX4 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
SHISA3A0PJX4 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC15.95■□□□□ 0.14
SHISA3A0PJX4 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
SHISA3A0PJX4 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
SHISA3A0PJX4 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
SHISA3A0PJX4 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC15.95■□□□□ 0.14
SHISA3A0PJX4 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC15.95■□□□□ 0.14
SHISA3A0PJX4 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
SHISA3A0PJX4 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
SHISA3A0PJX4 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC15.95■□□□□ 0.14
SHISA3A0PJX4 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC15.95■□□□□ 0.14
SHISA3A0PJX4 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
SHISA3A0PJX4 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
SHISA3A0PJX4 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
SHISA3A0PJX4 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
SHISA3A0PJX4 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
SHISA3A0PJX4 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC15.95■□□□□ 0.14
SHISA3A0PJX4 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC15.95■□□□□ 0.14
SHISA3A0PJX4 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
SHISA3A0PJX4 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
SHISA3A0PJX4 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
SHISA3A0PJX4 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
SHISA3A0PJX4 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
SHISA3A0PJX4 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC15.94■□□□□ 0.14
SHISA3A0PJX4 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
SHISA3A0PJX4 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC15.94■□□□□ 0.14
SHISA3A0PJX4 AC008894.3-201ENST00000624324 3103 ntBASIC15.94■□□□□ 0.14
SHISA3A0PJX4 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
SHISA3A0PJX4 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
SHISA3A0PJX4 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
SHISA3A0PJX4 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
SHISA3A0PJX4 AP000593.1-201ENST00000393668 712 ntBASIC15.94■□□□□ 0.14
SHISA3A0PJX4 DERL1-203ENST00000419562 918 ntTSL 2 BASIC15.94■□□□□ 0.14
SHISA3A0PJX4 AC004980.1-204ENST00000429707 299 ntBASIC15.94■□□□□ 0.14
SHISA3A0PJX4 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
SHISA3A0PJX4 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC15.94■□□□□ 0.14
SHISA3A0PJX4 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC15.94■□□□□ 0.14
SHISA3A0PJX4 TK2-208ENST00000545043 1120 ntTSL 2 BASIC15.94■□□□□ 0.14
SHISA3A0PJX4 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC15.94■□□□□ 0.14
SHISA3A0PJX4 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
SHISA3A0PJX4 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
SHISA3A0PJX4 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC15.94■□□□□ 0.14
SHISA3A0PJX4 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
SHISA3A0PJX4 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC15.94■□□□□ 0.14
SHISA3A0PJX4 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
SHISA3A0PJX4 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
SHISA3A0PJX4 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
SHISA3A0PJX4 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC15.94■□□□□ 0.14
SHISA3A0PJX4 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
SHISA3A0PJX4 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
SHISA3A0PJX4 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
SHISA3A0PJX4 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC15.94■□□□□ 0.14
SHISA3A0PJX4 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
SHISA3A0PJX4 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
SHISA3A0PJX4 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
SHISA3A0PJX4 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC15.93■□□□□ 0.14
SHISA3A0PJX4 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
SHISA3A0PJX4 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC15.93■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms