Protein–RNA interactions for Protein: A0A0C4DH34

IGHV4-28, Immunoglobulin heavy variable 4-28, humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV4-28A0A0C4DH34 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
IGHV4-28A0A0C4DH34 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
IGHV4-28A0A0C4DH34 AL020996.1-203ENST00000536896 2307 ntBASIC13.22□□□□□ -0.29
IGHV4-28A0A0C4DH34 AC098818.2-201ENST00000564925 2320 ntBASIC13.22□□□□□ -0.29
IGHV4-28A0A0C4DH34 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
IGHV4-28A0A0C4DH34 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
IGHV4-28A0A0C4DH34 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC13.21□□□□□ -0.29
IGHV4-28A0A0C4DH34 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC13.21□□□□□ -0.29
IGHV4-28A0A0C4DH34 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
IGHV4-28A0A0C4DH34 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
IGHV4-28A0A0C4DH34 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
IGHV4-28A0A0C4DH34 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
IGHV4-28A0A0C4DH34 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC13.21□□□□□ -0.29
IGHV4-28A0A0C4DH34 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC13.21□□□□□ -0.29
IGHV4-28A0A0C4DH34 AC093525.10-201ENST00000625130 1569 ntBASIC13.21□□□□□ -0.29
IGHV4-28A0A0C4DH34 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
IGHV4-28A0A0C4DH34 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
IGHV4-28A0A0C4DH34 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
IGHV4-28A0A0C4DH34 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
IGHV4-28A0A0C4DH34 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
IGHV4-28A0A0C4DH34 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
IGHV4-28A0A0C4DH34 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
IGHV4-28A0A0C4DH34 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
IGHV4-28A0A0C4DH34 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
IGHV4-28A0A0C4DH34 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
IGHV4-28A0A0C4DH34 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC13.21□□□□□ -0.29
IGHV4-28A0A0C4DH34 CNP-204ENST00000472031 1019 ntTSL 2 BASIC13.21□□□□□ -0.29
IGHV4-28A0A0C4DH34 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
IGHV4-28A0A0C4DH34 AP003733.1-201ENST00000491725 852 ntBASIC13.21□□□□□ -0.29
IGHV4-28A0A0C4DH34 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC13.21□□□□□ -0.29
IGHV4-28A0A0C4DH34 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC13.21□□□□□ -0.29
IGHV4-28A0A0C4DH34 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC13.21□□□□□ -0.29
IGHV4-28A0A0C4DH34 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC13.21□□□□□ -0.29
IGHV4-28A0A0C4DH34 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC13.21□□□□□ -0.29
IGHV4-28A0A0C4DH34 AC024563.2-201ENST00000603282 481 ntBASIC13.21□□□□□ -0.29
IGHV4-28A0A0C4DH34 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
IGHV4-28A0A0C4DH34 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC13.21□□□□□ -0.29
IGHV4-28A0A0C4DH34 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
IGHV4-28A0A0C4DH34 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
IGHV4-28A0A0C4DH34 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
IGHV4-28A0A0C4DH34 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
IGHV4-28A0A0C4DH34 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
IGHV4-28A0A0C4DH34 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
IGHV4-28A0A0C4DH34 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
IGHV4-28A0A0C4DH34 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
IGHV4-28A0A0C4DH34 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
IGHV4-28A0A0C4DH34 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC13.21□□□□□ -0.3
IGHV4-28A0A0C4DH34 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
IGHV4-28A0A0C4DH34 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
IGHV4-28A0A0C4DH34 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
IGHV4-28A0A0C4DH34 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
IGHV4-28A0A0C4DH34 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC13.2□□□□□ -0.3
IGHV4-28A0A0C4DH34 AP000974.1-201ENST00000623909 2387 ntBASIC13.2□□□□□ -0.3
IGHV4-28A0A0C4DH34 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
IGHV4-28A0A0C4DH34 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
IGHV4-28A0A0C4DH34 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC13.2□□□□□ -0.3
IGHV4-28A0A0C4DH34 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
IGHV4-28A0A0C4DH34 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC13.2□□□□□ -0.3
IGHV4-28A0A0C4DH34 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
IGHV4-28A0A0C4DH34 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
IGHV4-28A0A0C4DH34 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
IGHV4-28A0A0C4DH34 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
IGHV4-28A0A0C4DH34 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC13.2□□□□□ -0.3
IGHV4-28A0A0C4DH34 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
IGHV4-28A0A0C4DH34 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC13.2□□□□□ -0.3
IGHV4-28A0A0C4DH34 BX276092.5-203ENST00000456199 560 ntBASIC13.2□□□□□ -0.3
IGHV4-28A0A0C4DH34 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC13.2□□□□□ -0.3
IGHV4-28A0A0C4DH34 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC13.2□□□□□ -0.3
IGHV4-28A0A0C4DH34 AL121672.3-201ENST00000608644 468 ntBASIC13.2□□□□□ -0.3
IGHV4-28A0A0C4DH34 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC13.2□□□□□ -0.3
IGHV4-28A0A0C4DH34 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
IGHV4-28A0A0C4DH34 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
IGHV4-28A0A0C4DH34 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC13.2□□□□□ -0.3
IGHV4-28A0A0C4DH34 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC13.2□□□□□ -0.3
IGHV4-28A0A0C4DH34 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
IGHV4-28A0A0C4DH34 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
IGHV4-28A0A0C4DH34 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
IGHV4-28A0A0C4DH34 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
IGHV4-28A0A0C4DH34 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC13.2□□□□□ -0.3
IGHV4-28A0A0C4DH34 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC13.2□□□□□ -0.3
IGHV4-28A0A0C4DH34 UROS-202ENST00000368778 1556 ntTSL 2 BASIC13.2□□□□□ -0.3
IGHV4-28A0A0C4DH34 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC13.2□□□□□ -0.3
IGHV4-28A0A0C4DH34 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
IGHV4-28A0A0C4DH34 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
IGHV4-28A0A0C4DH34 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
IGHV4-28A0A0C4DH34 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
IGHV4-28A0A0C4DH34 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC13.19□□□□□ -0.3
IGHV4-28A0A0C4DH34 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
IGHV4-28A0A0C4DH34 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
IGHV4-28A0A0C4DH34 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC13.19□□□□□ -0.3
IGHV4-28A0A0C4DH34 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
IGHV4-28A0A0C4DH34 TNXA-203ENST00000507684 2038 ntBASIC13.19□□□□□ -0.3
IGHV4-28A0A0C4DH34 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
IGHV4-28A0A0C4DH34 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
IGHV4-28A0A0C4DH34 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
IGHV4-28A0A0C4DH34 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC13.19□□□□□ -0.3
IGHV4-28A0A0C4DH34 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
IGHV4-28A0A0C4DH34 TSPY22P-201ENST00000427496 604 ntBASIC13.19□□□□□ -0.3
IGHV4-28A0A0C4DH34 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC13.19□□□□□ -0.3
IGHV4-28A0A0C4DH34 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC13.19□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 51.7 ms