Protein–RNA interactions for Protein: A0A0B4J1U4

TRGV5, T-cell receptor gamma variable 5 (Fragment), humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV5A0A0B4J1U4 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TRGV5A0A0B4J1U4 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TRGV5A0A0B4J1U4 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TRGV5A0A0B4J1U4 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC16.38■□□□□ 0.21
TRGV5A0A0B4J1U4 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TRGV5A0A0B4J1U4 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC16.38■□□□□ 0.21
TRGV5A0A0B4J1U4 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
TRGV5A0A0B4J1U4 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
TRGV5A0A0B4J1U4 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC16.37■□□□□ 0.21
TRGV5A0A0B4J1U4 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TRGV5A0A0B4J1U4 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TRGV5A0A0B4J1U4 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TRGV5A0A0B4J1U4 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TRGV5A0A0B4J1U4 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
TRGV5A0A0B4J1U4 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
TRGV5A0A0B4J1U4 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TRGV5A0A0B4J1U4 NARF-204ENST00000390006 1766 ntTSL 2 BASIC16.37■□□□□ 0.21
TRGV5A0A0B4J1U4 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TRGV5A0A0B4J1U4 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC16.37■□□□□ 0.21
TRGV5A0A0B4J1U4 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TRGV5A0A0B4J1U4 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC16.37■□□□□ 0.21
TRGV5A0A0B4J1U4 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TRGV5A0A0B4J1U4 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC16.37■□□□□ 0.21
TRGV5A0A0B4J1U4 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC16.37■□□□□ 0.21
TRGV5A0A0B4J1U4 AL845331.1-201ENST00000424978 1190 ntBASIC16.37■□□□□ 0.21
TRGV5A0A0B4J1U4 IGHV3-47-201ENST00000425060 335 ntBASIC16.37■□□□□ 0.21
TRGV5A0A0B4J1U4 MINOS1P3-201ENST00000457048 203 ntBASIC16.37■□□□□ 0.21
TRGV5A0A0B4J1U4 KRT18P31-201ENST00000506277 1292 ntBASIC16.37■□□□□ 0.21
TRGV5A0A0B4J1U4 UNC93B7-201ENST00000509439 705 ntBASIC16.37■□□□□ 0.21
TRGV5A0A0B4J1U4 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
TRGV5A0A0B4J1U4 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC16.37■□□□□ 0.21
TRGV5A0A0B4J1U4 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
TRGV5A0A0B4J1U4 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TRGV5A0A0B4J1U4 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TRGV5A0A0B4J1U4 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
TRGV5A0A0B4J1U4 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC16.37■□□□□ 0.21
TRGV5A0A0B4J1U4 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
TRGV5A0A0B4J1U4 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
TRGV5A0A0B4J1U4 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
TRGV5A0A0B4J1U4 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
TRGV5A0A0B4J1U4 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TRGV5A0A0B4J1U4 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TRGV5A0A0B4J1U4 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
TRGV5A0A0B4J1U4 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC16.36■□□□□ 0.21
TRGV5A0A0B4J1U4 NSUN5P1-202ENST00000421140 1535 ntBASIC16.36■□□□□ 0.21
TRGV5A0A0B4J1U4 NSUN5P2-203ENST00000457352 1529 ntBASIC16.36■□□□□ 0.21
TRGV5A0A0B4J1U4 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TRGV5A0A0B4J1U4 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TRGV5A0A0B4J1U4 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TRGV5A0A0B4J1U4 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TRGV5A0A0B4J1U4 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
TRGV5A0A0B4J1U4 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TRGV5A0A0B4J1U4 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
TRGV5A0A0B4J1U4 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC16.36■□□□□ 0.21
TRGV5A0A0B4J1U4 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
TRGV5A0A0B4J1U4 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC16.36■□□□□ 0.21
TRGV5A0A0B4J1U4 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC16.36■□□□□ 0.21
TRGV5A0A0B4J1U4 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC16.36■□□□□ 0.21
TRGV5A0A0B4J1U4 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC16.36■□□□□ 0.21
TRGV5A0A0B4J1U4 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC16.36■□□□□ 0.21
TRGV5A0A0B4J1U4 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TRGV5A0A0B4J1U4 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
TRGV5A0A0B4J1U4 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TRGV5A0A0B4J1U4 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC16.36■□□□□ 0.21
TRGV5A0A0B4J1U4 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
TRGV5A0A0B4J1U4 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
TRGV5A0A0B4J1U4 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TRGV5A0A0B4J1U4 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
TRGV5A0A0B4J1U4 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TRGV5A0A0B4J1U4 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
TRGV5A0A0B4J1U4 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TRGV5A0A0B4J1U4 AC005082.1-201ENST00000413042 2259 ntBASIC16.35■□□□□ 0.21
TRGV5A0A0B4J1U4 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
TRGV5A0A0B4J1U4 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TRGV5A0A0B4J1U4 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TRGV5A0A0B4J1U4 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
TRGV5A0A0B4J1U4 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TRGV5A0A0B4J1U4 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
TRGV5A0A0B4J1U4 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
TRGV5A0A0B4J1U4 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TRGV5A0A0B4J1U4 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
TRGV5A0A0B4J1U4 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC16.35■□□□□ 0.21
TRGV5A0A0B4J1U4 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
TRGV5A0A0B4J1U4 FAAHP1-202ENST00000446499 1238 ntBASIC16.35■□□□□ 0.21
TRGV5A0A0B4J1U4 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC16.35■□□□□ 0.21
TRGV5A0A0B4J1U4 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
TRGV5A0A0B4J1U4 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC16.35■□□□□ 0.21
TRGV5A0A0B4J1U4 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC16.35■□□□□ 0.21
TRGV5A0A0B4J1U4 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
TRGV5A0A0B4J1U4 TPM1-218ENST00000559281 851 ntTSL 5 BASIC16.35■□□□□ 0.21
TRGV5A0A0B4J1U4 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
TRGV5A0A0B4J1U4 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
TRGV5A0A0B4J1U4 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC16.35■□□□□ 0.21
TRGV5A0A0B4J1U4 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
TRGV5A0A0B4J1U4 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
TRGV5A0A0B4J1U4 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC16.35■□□□□ 0.21
TRGV5A0A0B4J1U4 LINC01126-201ENST00000623515 1646 ntBASIC16.34■□□□□ 0.21
TRGV5A0A0B4J1U4 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
TRGV5A0A0B4J1U4 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TRGV5A0A0B4J1U4 AL031598.1-201ENST00000561511 1773 ntBASIC16.34■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms