Protein–RNA interactions for Protein: A0A087WT01

TRAV27, T-cell receptor alpha variable 27 (Fragment), humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV27A0A087WT01 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TRAV27A0A087WT01 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TRAV27A0A087WT01 AP000997.3-201ENST00000623333 2250 ntBASIC16.6■□□□□ 0.25
TRAV27A0A087WT01 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC16.6■□□□□ 0.25
TRAV27A0A087WT01 UNC93B2-201ENST00000285383 730 ntBASIC16.6■□□□□ 0.25
TRAV27A0A087WT01 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TRAV27A0A087WT01 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TRAV27A0A087WT01 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TRAV27A0A087WT01 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
TRAV27A0A087WT01 TSPY7P-201ENST00000431358 1114 ntBASIC16.6■□□□□ 0.25
TRAV27A0A087WT01 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC16.6■□□□□ 0.25
TRAV27A0A087WT01 RBM17P1-201ENST00000453646 1190 ntBASIC16.6■□□□□ 0.25
TRAV27A0A087WT01 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC16.6■□□□□ 0.25
TRAV27A0A087WT01 AP003041.3-201ENST00000527151 707 ntBASIC16.6■□□□□ 0.25
TRAV27A0A087WT01 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC16.6■□□□□ 0.25
TRAV27A0A087WT01 NAT14-202ENST00000587400 416 ntTSL 5 BASIC16.6■□□□□ 0.25
TRAV27A0A087WT01 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TRAV27A0A087WT01 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
TRAV27A0A087WT01 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
TRAV27A0A087WT01 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
TRAV27A0A087WT01 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TRAV27A0A087WT01 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
TRAV27A0A087WT01 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC16.6■□□□□ 0.25
TRAV27A0A087WT01 AL163051.1-201ENST00000569214 1512 ntBASIC16.6■□□□□ 0.25
TRAV27A0A087WT01 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC16.6■□□□□ 0.25
TRAV27A0A087WT01 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC16.6■□□□□ 0.25
TRAV27A0A087WT01 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
TRAV27A0A087WT01 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
TRAV27A0A087WT01 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TRAV27A0A087WT01 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC16.6■□□□□ 0.25
TRAV27A0A087WT01 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRAV27A0A087WT01 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC16.59■□□□□ 0.25
TRAV27A0A087WT01 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
TRAV27A0A087WT01 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRAV27A0A087WT01 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
TRAV27A0A087WT01 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRAV27A0A087WT01 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRAV27A0A087WT01 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRAV27A0A087WT01 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
TRAV27A0A087WT01 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
TRAV27A0A087WT01 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC16.59■□□□□ 0.25
TRAV27A0A087WT01 HIST1H2APS4-201ENST00000362070 348 ntBASIC16.59■□□□□ 0.25
TRAV27A0A087WT01 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRAV27A0A087WT01 KRT18P23-201ENST00000435622 1283 ntBASIC16.59■□□□□ 0.25
TRAV27A0A087WT01 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC16.59■□□□□ 0.25
TRAV27A0A087WT01 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC16.59■□□□□ 0.25
TRAV27A0A087WT01 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
TRAV27A0A087WT01 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC16.59■□□□□ 0.25
TRAV27A0A087WT01 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRAV27A0A087WT01 AP000525.1-201ENST00000608286 694 ntBASIC16.59■□□□□ 0.25
TRAV27A0A087WT01 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
TRAV27A0A087WT01 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRAV27A0A087WT01 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
TRAV27A0A087WT01 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRAV27A0A087WT01 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
TRAV27A0A087WT01 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
TRAV27A0A087WT01 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRAV27A0A087WT01 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRAV27A0A087WT01 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRAV27A0A087WT01 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC16.59■□□□□ 0.25
TRAV27A0A087WT01 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRAV27A0A087WT01 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.25
TRAV27A0A087WT01 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
TRAV27A0A087WT01 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC16.58■□□□□ 0.25
TRAV27A0A087WT01 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
TRAV27A0A087WT01 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
TRAV27A0A087WT01 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
TRAV27A0A087WT01 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
TRAV27A0A087WT01 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
TRAV27A0A087WT01 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.25
TRAV27A0A087WT01 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
TRAV27A0A087WT01 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC16.58■□□□□ 0.25
TRAV27A0A087WT01 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
TRAV27A0A087WT01 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
TRAV27A0A087WT01 BAALC-201ENST00000297574 801 ntTSL 3 BASIC16.58■□□□□ 0.24
TRAV27A0A087WT01 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
TRAV27A0A087WT01 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.24
TRAV27A0A087WT01 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC16.58■□□□□ 0.24
TRAV27A0A087WT01 AL390955.1-201ENST00000428694 934 ntBASIC16.58■□□□□ 0.24
TRAV27A0A087WT01 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC16.58■□□□□ 0.24
TRAV27A0A087WT01 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC16.58■□□□□ 0.24
TRAV27A0A087WT01 AC008550.1-201ENST00000511500 884 ntBASIC16.58■□□□□ 0.24
TRAV27A0A087WT01 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC16.58■□□□□ 0.24
TRAV27A0A087WT01 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC16.58■□□□□ 0.24
TRAV27A0A087WT01 AL023803.3-201ENST00000615559 522 ntBASIC16.58■□□□□ 0.24
TRAV27A0A087WT01 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
TRAV27A0A087WT01 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC16.58■□□□□ 0.24
TRAV27A0A087WT01 AC009102.3-201ENST00000623118 1491 ntBASIC16.58■□□□□ 0.24
TRAV27A0A087WT01 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
TRAV27A0A087WT01 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC16.58■□□□□ 0.24
TRAV27A0A087WT01 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
TRAV27A0A087WT01 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC16.58■□□□□ 0.24
TRAV27A0A087WT01 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
TRAV27A0A087WT01 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC16.58■□□□□ 0.24
TRAV27A0A087WT01 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
TRAV27A0A087WT01 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC16.58■□□□□ 0.24
TRAV27A0A087WT01 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
TRAV27A0A087WT01 STK4-201ENST00000372801 2038 ntTSL 2 BASIC16.58■□□□□ 0.24
TRAV27A0A087WT01 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC16.58■□□□□ 0.24
TRAV27A0A087WT01 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 37 ms