Protein–RNA interactions for Protein: Q9Y5F3

PCDHB1, Protocadherin beta-1, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1Q9Y5F3 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PCDHB1Q9Y5F3 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC18.32■□□□□ 0.52
PCDHB1Q9Y5F3 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC18.32■□□□□ 0.52
PCDHB1Q9Y5F3 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
PCDHB1Q9Y5F3 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
PCDHB1Q9Y5F3 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC18.32■□□□□ 0.52
PCDHB1Q9Y5F3 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PCDHB1Q9Y5F3 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PCDHB1Q9Y5F3 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
PCDHB1Q9Y5F3 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PCDHB1Q9Y5F3 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC18.31■□□□□ 0.52
PCDHB1Q9Y5F3 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
PCDHB1Q9Y5F3 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC18.31■□□□□ 0.52
PCDHB1Q9Y5F3 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
PCDHB1Q9Y5F3 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
PCDHB1Q9Y5F3 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PCDHB1Q9Y5F3 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
PCDHB1Q9Y5F3 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
PCDHB1Q9Y5F3 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PCDHB1Q9Y5F3 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
PCDHB1Q9Y5F3 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC18.31■□□□□ 0.52
PCDHB1Q9Y5F3 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
PCDHB1Q9Y5F3 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC18.31■□□□□ 0.52
PCDHB1Q9Y5F3 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC18.31■□□□□ 0.52
PCDHB1Q9Y5F3 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
PCDHB1Q9Y5F3 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
PCDHB1Q9Y5F3 ADK-206ENST00000541550 2222 ntTSL 2 BASIC18.31■□□□□ 0.52
PCDHB1Q9Y5F3 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PCDHB1Q9Y5F3 BICD1-207ENST00000551848 1962 ntBASIC18.31■□□□□ 0.52
PCDHB1Q9Y5F3 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC18.31■□□□□ 0.52
PCDHB1Q9Y5F3 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
PCDHB1Q9Y5F3 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PCDHB1Q9Y5F3 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PCDHB1Q9Y5F3 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC18.31■□□□□ 0.52
PCDHB1Q9Y5F3 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PCDHB1Q9Y5F3 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC18.3■□□□□ 0.52
PCDHB1Q9Y5F3 MADD-208ENST00000405573 1823 ntTSL 5 BASIC18.3■□□□□ 0.52
PCDHB1Q9Y5F3 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
PCDHB1Q9Y5F3 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
PCDHB1Q9Y5F3 AC135050.7-201ENST00000624508 2218 ntBASIC18.3■□□□□ 0.52
PCDHB1Q9Y5F3 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
PCDHB1Q9Y5F3 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PCDHB1Q9Y5F3 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
PCDHB1Q9Y5F3 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC18.3■□□□□ 0.52
PCDHB1Q9Y5F3 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PCDHB1Q9Y5F3 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PCDHB1Q9Y5F3 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
PCDHB1Q9Y5F3 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC18.3■□□□□ 0.52
PCDHB1Q9Y5F3 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PCDHB1Q9Y5F3 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PCDHB1Q9Y5F3 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
PCDHB1Q9Y5F3 SPDYE13P-201ENST00000445314 798 ntBASIC18.3■□□□□ 0.52
PCDHB1Q9Y5F3 FGF14-AS2-201ENST00000606448 1074 ntBASIC18.3■□□□□ 0.52
PCDHB1Q9Y5F3 AC092119.3-201ENST00000612618 583 ntBASIC18.3■□□□□ 0.52
PCDHB1Q9Y5F3 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC18.3■□□□□ 0.52
PCDHB1Q9Y5F3 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC18.3■□□□□ 0.52
PCDHB1Q9Y5F3 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
PCDHB1Q9Y5F3 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
PCDHB1Q9Y5F3 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
PCDHB1Q9Y5F3 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PCDHB1Q9Y5F3 COMP-202ENST00000425807 2292 ntTSL 2 BASIC18.29■□□□□ 0.52
PCDHB1Q9Y5F3 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC18.29■□□□□ 0.52
PCDHB1Q9Y5F3 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC18.29■□□□□ 0.52
PCDHB1Q9Y5F3 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PCDHB1Q9Y5F3 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
PCDHB1Q9Y5F3 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC18.29■□□□□ 0.52
PCDHB1Q9Y5F3 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC18.29■□□□□ 0.52
PCDHB1Q9Y5F3 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC18.29■□□□□ 0.52
PCDHB1Q9Y5F3 AC009065.1-201ENST00000564055 1225 ntBASIC18.29■□□□□ 0.52
PCDHB1Q9Y5F3 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
PCDHB1Q9Y5F3 AC112497.1-201ENST00000624824 639 ntBASIC18.29■□□□□ 0.52
PCDHB1Q9Y5F3 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
PCDHB1Q9Y5F3 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PCDHB1Q9Y5F3 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC18.29■□□□□ 0.52
PCDHB1Q9Y5F3 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PCDHB1Q9Y5F3 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PCDHB1Q9Y5F3 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC18.29■□□□□ 0.52
PCDHB1Q9Y5F3 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
PCDHB1Q9Y5F3 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
PCDHB1Q9Y5F3 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PCDHB1Q9Y5F3 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
PCDHB1Q9Y5F3 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
PCDHB1Q9Y5F3 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
PCDHB1Q9Y5F3 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC18.28■□□□□ 0.52
PCDHB1Q9Y5F3 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC18.28■□□□□ 0.52
PCDHB1Q9Y5F3 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PCDHB1Q9Y5F3 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PCDHB1Q9Y5F3 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
PCDHB1Q9Y5F3 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
PCDHB1Q9Y5F3 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
PCDHB1Q9Y5F3 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PCDHB1Q9Y5F3 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PCDHB1Q9Y5F3 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PCDHB1Q9Y5F3 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC18.28■□□□□ 0.52
PCDHB1Q9Y5F3 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
PCDHB1Q9Y5F3 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
PCDHB1Q9Y5F3 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PCDHB1Q9Y5F3 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PCDHB1Q9Y5F3 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
PCDHB1Q9Y5F3 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 40.8 ms