Protein–RNA interactions for Protein: Q9Y5F2

PCDHB11, Protocadherin beta-11, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11Q9Y5F2 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
PCDHB11Q9Y5F2 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC17.95■□□□□ 0.46
PCDHB11Q9Y5F2 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PCDHB11Q9Y5F2 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PCDHB11Q9Y5F2 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
PCDHB11Q9Y5F2 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC17.95■□□□□ 0.46
PCDHB11Q9Y5F2 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC17.95■□□□□ 0.46
PCDHB11Q9Y5F2 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PCDHB11Q9Y5F2 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PCDHB11Q9Y5F2 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
PCDHB11Q9Y5F2 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC17.95■□□□□ 0.46
PCDHB11Q9Y5F2 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PCDHB11Q9Y5F2 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PCDHB11Q9Y5F2 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PCDHB11Q9Y5F2 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PCDHB11Q9Y5F2 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PCDHB11Q9Y5F2 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC17.95■□□□□ 0.46
PCDHB11Q9Y5F2 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC17.95■□□□□ 0.46
PCDHB11Q9Y5F2 PRELID1P1-202ENST00000567272 903 ntBASIC17.95■□□□□ 0.46
PCDHB11Q9Y5F2 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
PCDHB11Q9Y5F2 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC17.95■□□□□ 0.46
PCDHB11Q9Y5F2 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
PCDHB11Q9Y5F2 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
PCDHB11Q9Y5F2 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PCDHB11Q9Y5F2 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC17.95■□□□□ 0.46
PCDHB11Q9Y5F2 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
PCDHB11Q9Y5F2 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC17.95■□□□□ 0.46
PCDHB11Q9Y5F2 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC17.95■□□□□ 0.46
PCDHB11Q9Y5F2 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
PCDHB11Q9Y5F2 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
PCDHB11Q9Y5F2 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC17.94■□□□□ 0.46
PCDHB11Q9Y5F2 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
PCDHB11Q9Y5F2 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC17.94■□□□□ 0.46
PCDHB11Q9Y5F2 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC17.94■□□□□ 0.46
PCDHB11Q9Y5F2 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
PCDHB11Q9Y5F2 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
PCDHB11Q9Y5F2 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
PCDHB11Q9Y5F2 AP000593.1-201ENST00000393668 712 ntBASIC17.94■□□□□ 0.46
PCDHB11Q9Y5F2 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC17.94■□□□□ 0.46
PCDHB11Q9Y5F2 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC17.94■□□□□ 0.46
PCDHB11Q9Y5F2 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC17.94■□□□□ 0.46
PCDHB11Q9Y5F2 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC17.94■□□□□ 0.46
PCDHB11Q9Y5F2 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC17.94■□□□□ 0.46
PCDHB11Q9Y5F2 MIR3652-201ENST00000579335 131 ntBASIC17.94■□□□□ 0.46
PCDHB11Q9Y5F2 HYMAI.1-201ENST00000620949 238 ntBASIC17.94■□□□□ 0.46
PCDHB11Q9Y5F2 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC17.94■□□□□ 0.46
PCDHB11Q9Y5F2 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC17.94■□□□□ 0.46
PCDHB11Q9Y5F2 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
PCDHB11Q9Y5F2 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
PCDHB11Q9Y5F2 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
PCDHB11Q9Y5F2 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC17.94■□□□□ 0.46
PCDHB11Q9Y5F2 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
PCDHB11Q9Y5F2 AC135050.7-201ENST00000624508 2218 ntBASIC17.94■□□□□ 0.46
PCDHB11Q9Y5F2 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PCDHB11Q9Y5F2 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC17.93■□□□□ 0.46
PCDHB11Q9Y5F2 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC17.93■□□□□ 0.46
PCDHB11Q9Y5F2 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC17.93■□□□□ 0.46
PCDHB11Q9Y5F2 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC17.93■□□□□ 0.46
PCDHB11Q9Y5F2 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PCDHB11Q9Y5F2 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC17.93■□□□□ 0.46
PCDHB11Q9Y5F2 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PCDHB11Q9Y5F2 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
PCDHB11Q9Y5F2 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PCDHB11Q9Y5F2 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PCDHB11Q9Y5F2 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
PCDHB11Q9Y5F2 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PCDHB11Q9Y5F2 AL645929.1-201ENST00000420084 975 ntBASIC17.93■□□□□ 0.46
PCDHB11Q9Y5F2 SPDYE15P-201ENST00000424157 909 ntBASIC17.93■□□□□ 0.46
PCDHB11Q9Y5F2 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC17.93■□□□□ 0.46
PCDHB11Q9Y5F2 RASA4DP-201ENST00000460726 1199 ntBASIC17.93■□□□□ 0.46
PCDHB11Q9Y5F2 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC17.93■□□□□ 0.46
PCDHB11Q9Y5F2 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC17.93■□□□□ 0.46
PCDHB11Q9Y5F2 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
PCDHB11Q9Y5F2 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC17.93■□□□□ 0.46
PCDHB11Q9Y5F2 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PCDHB11Q9Y5F2 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PCDHB11Q9Y5F2 COMP-202ENST00000425807 2292 ntTSL 2 BASIC17.93■□□□□ 0.46
PCDHB11Q9Y5F2 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC17.93■□□□□ 0.46
PCDHB11Q9Y5F2 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC17.93■□□□□ 0.46
PCDHB11Q9Y5F2 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
PCDHB11Q9Y5F2 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PCDHB11Q9Y5F2 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
PCDHB11Q9Y5F2 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC17.93■□□□□ 0.46
PCDHB11Q9Y5F2 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
PCDHB11Q9Y5F2 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PCDHB11Q9Y5F2 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
PCDHB11Q9Y5F2 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PCDHB11Q9Y5F2 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
PCDHB11Q9Y5F2 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC17.92■□□□□ 0.46
PCDHB11Q9Y5F2 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PCDHB11Q9Y5F2 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PCDHB11Q9Y5F2 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PCDHB11Q9Y5F2 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC17.92■□□□□ 0.46
PCDHB11Q9Y5F2 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC17.92■□□□□ 0.46
PCDHB11Q9Y5F2 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
PCDHB11Q9Y5F2 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC17.92■□□□□ 0.46
PCDHB11Q9Y5F2 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC17.92■□□□□ 0.46
PCDHB11Q9Y5F2 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC17.92■□□□□ 0.46
PCDHB11Q9Y5F2 AC092329.2-201ENST00000598402 547 ntBASIC17.92■□□□□ 0.46
PCDHB11Q9Y5F2 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms