Protein–RNA interactions for Protein: Q9Y5F0

PCDHB13, Protocadherin beta-13, humanhuman

Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB13Q9Y5F0 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC20.24■□□□□ 0.83
PCDHB13Q9Y5F0 GMCL1P1-201ENST00000463439 1581 ntBASIC20.24■□□□□ 0.83
PCDHB13Q9Y5F0 AL162741.1-201ENST00000565563 1558 ntBASIC20.24■□□□□ 0.83
PCDHB13Q9Y5F0 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
PCDHB13Q9Y5F0 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC20.24■□□□□ 0.83
PCDHB13Q9Y5F0 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
PCDHB13Q9Y5F0 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
PCDHB13Q9Y5F0 AC007613.1-201ENST00000572811 2597 ntBASIC20.24■□□□□ 0.83
PCDHB13Q9Y5F0 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
PCDHB13Q9Y5F0 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PCDHB13Q9Y5F0 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
PCDHB13Q9Y5F0 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PCDHB13Q9Y5F0 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
PCDHB13Q9Y5F0 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PCDHB13Q9Y5F0 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC20.23■□□□□ 0.83
PCDHB13Q9Y5F0 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PCDHB13Q9Y5F0 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
PCDHB13Q9Y5F0 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PCDHB13Q9Y5F0 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
PCDHB13Q9Y5F0 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
PCDHB13Q9Y5F0 AK4P3-201ENST00000418260 669 ntBASIC20.23■□□□□ 0.83
PCDHB13Q9Y5F0 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC20.23■□□□□ 0.83
PCDHB13Q9Y5F0 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC20.23■□□□□ 0.83
PCDHB13Q9Y5F0 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
PCDHB13Q9Y5F0 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC20.23■□□□□ 0.83
PCDHB13Q9Y5F0 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
PCDHB13Q9Y5F0 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC20.23■□□□□ 0.83
PCDHB13Q9Y5F0 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
PCDHB13Q9Y5F0 AC006011.2-201ENST00000621313 1158 ntBASIC20.23■□□□□ 0.83
PCDHB13Q9Y5F0 AL157888.1-201ENST00000631930 593 ntBASIC20.23■□□□□ 0.83
PCDHB13Q9Y5F0 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC20.23■□□□□ 0.83
PCDHB13Q9Y5F0 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
PCDHB13Q9Y5F0 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
PCDHB13Q9Y5F0 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
PCDHB13Q9Y5F0 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PCDHB13Q9Y5F0 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC20.23■□□□□ 0.83
PCDHB13Q9Y5F0 ASL-204ENST00000395331 1538 ntTSL 5 BASIC20.22■□□□□ 0.83
PCDHB13Q9Y5F0 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
PCDHB13Q9Y5F0 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PCDHB13Q9Y5F0 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
PCDHB13Q9Y5F0 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC20.22■□□□□ 0.83
PCDHB13Q9Y5F0 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC20.22■□□□□ 0.83
PCDHB13Q9Y5F0 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PCDHB13Q9Y5F0 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PCDHB13Q9Y5F0 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
PCDHB13Q9Y5F0 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PCDHB13Q9Y5F0 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
PCDHB13Q9Y5F0 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC20.22■□□□□ 0.83
PCDHB13Q9Y5F0 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC20.22■□□□□ 0.83
PCDHB13Q9Y5F0 AC104076.2-201ENST00000448912 469 ntBASIC20.22■□□□□ 0.83
PCDHB13Q9Y5F0 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC20.22■□□□□ 0.83
PCDHB13Q9Y5F0 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC20.22■□□□□ 0.83
PCDHB13Q9Y5F0 REEP1-209ENST00000541910 969 ntTSL 2 BASIC20.22■□□□□ 0.83
PCDHB13Q9Y5F0 RN7SL850P-201ENST00000579959 291 ntBASIC20.22■□□□□ 0.83
PCDHB13Q9Y5F0 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC20.22■□□□□ 0.83
PCDHB13Q9Y5F0 RN7SL718P-201ENST00000581254 303 ntBASIC20.22■□□□□ 0.83
PCDHB13Q9Y5F0 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PCDHB13Q9Y5F0 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC20.22■□□□□ 0.83
PCDHB13Q9Y5F0 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC20.22■□□□□ 0.83
PCDHB13Q9Y5F0 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
PCDHB13Q9Y5F0 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
PCDHB13Q9Y5F0 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
PCDHB13Q9Y5F0 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PCDHB13Q9Y5F0 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
PCDHB13Q9Y5F0 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
PCDHB13Q9Y5F0 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC20.22■□□□□ 0.83
PCDHB13Q9Y5F0 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PCDHB13Q9Y5F0 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC20.22■□□□□ 0.83
PCDHB13Q9Y5F0 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PCDHB13Q9Y5F0 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
PCDHB13Q9Y5F0 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
PCDHB13Q9Y5F0 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
PCDHB13Q9Y5F0 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PCDHB13Q9Y5F0 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PCDHB13Q9Y5F0 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC20.21■□□□□ 0.83
PCDHB13Q9Y5F0 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC20.21■□□□□ 0.83
PCDHB13Q9Y5F0 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PCDHB13Q9Y5F0 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
PCDHB13Q9Y5F0 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PCDHB13Q9Y5F0 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
PCDHB13Q9Y5F0 MADD-208ENST00000405573 1823 ntTSL 5 BASIC20.21■□□□□ 0.83
PCDHB13Q9Y5F0 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC20.21■□□□□ 0.83
PCDHB13Q9Y5F0 AC135050.7-201ENST00000624508 2218 ntBASIC20.21■□□□□ 0.83
PCDHB13Q9Y5F0 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
PCDHB13Q9Y5F0 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PCDHB13Q9Y5F0 STARP1-201ENST00000397973 869 ntBASIC20.21■□□□□ 0.83
PCDHB13Q9Y5F0 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
PCDHB13Q9Y5F0 TMPOP1-202ENST00000424642 1267 ntBASIC20.21■□□□□ 0.83
PCDHB13Q9Y5F0 RASA4DP-201ENST00000460726 1199 ntBASIC20.21■□□□□ 0.83
PCDHB13Q9Y5F0 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC20.21■□□□□ 0.83
PCDHB13Q9Y5F0 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
PCDHB13Q9Y5F0 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
PCDHB13Q9Y5F0 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
PCDHB13Q9Y5F0 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PCDHB13Q9Y5F0 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC20.21■□□□□ 0.83
PCDHB13Q9Y5F0 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
PCDHB13Q9Y5F0 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC20.21■□□□□ 0.83
PCDHB13Q9Y5F0 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC20.21■□□□□ 0.83
PCDHB13Q9Y5F0 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PCDHB13Q9Y5F0 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms