Protein–RNA interactions for Protein: Q9Y2P8

RCL1, RNA 3'-terminal phosphate cyclase-like protein, humanhuman

Known RBP Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCL1Q9Y2P8 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC15□□□□□ -0.01
RCL1Q9Y2P8 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC15□□□□□ -0.01
RCL1Q9Y2P8 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
RCL1Q9Y2P8 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
RCL1Q9Y2P8 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC15□□□□□ -0.01
RCL1Q9Y2P8 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
RCL1Q9Y2P8 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC14.99□□□□□ -0.01
RCL1Q9Y2P8 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
RCL1Q9Y2P8 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
RCL1Q9Y2P8 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC14.99□□□□□ -0.01
RCL1Q9Y2P8 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
RCL1Q9Y2P8 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
RCL1Q9Y2P8 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC14.99□□□□□ -0.01
RCL1Q9Y2P8 AC105036.2-201ENST00000569468 176 ntBASIC14.99□□□□□ -0.01
RCL1Q9Y2P8 MNT-208ENST00000575394 606 ntTSL 4 BASIC14.99□□□□□ -0.01
RCL1Q9Y2P8 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC14.99□□□□□ -0.01
RCL1Q9Y2P8 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC14.99□□□□□ -0.01
RCL1Q9Y2P8 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
RCL1Q9Y2P8 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
RCL1Q9Y2P8 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
RCL1Q9Y2P8 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC14.99□□□□□ -0.01
RCL1Q9Y2P8 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
RCL1Q9Y2P8 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
RCL1Q9Y2P8 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
RCL1Q9Y2P8 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
RCL1Q9Y2P8 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
RCL1Q9Y2P8 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
RCL1Q9Y2P8 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC14.99□□□□□ -0.01
RCL1Q9Y2P8 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC14.99□□□□□ -0.01
RCL1Q9Y2P8 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
RCL1Q9Y2P8 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
RCL1Q9Y2P8 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
RCL1Q9Y2P8 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
RCL1Q9Y2P8 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
RCL1Q9Y2P8 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC14.98□□□□□ -0.01
RCL1Q9Y2P8 MYLKP1-201ENST00000509077 1580 ntBASIC14.98□□□□□ -0.01
RCL1Q9Y2P8 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC14.98□□□□□ -0.01
RCL1Q9Y2P8 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC14.98□□□□□ -0.01
RCL1Q9Y2P8 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
RCL1Q9Y2P8 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
RCL1Q9Y2P8 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
RCL1Q9Y2P8 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC14.98□□□□□ -0.01
RCL1Q9Y2P8 AL096828.2-201ENST00000567259 1965 ntBASIC14.98□□□□□ -0.01
RCL1Q9Y2P8 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
RCL1Q9Y2P8 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC14.98□□□□□ -0.01
RCL1Q9Y2P8 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
RCL1Q9Y2P8 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
RCL1Q9Y2P8 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
RCL1Q9Y2P8 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
RCL1Q9Y2P8 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
RCL1Q9Y2P8 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
RCL1Q9Y2P8 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC14.98□□□□□ -0.01
RCL1Q9Y2P8 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC14.98□□□□□ -0.01
RCL1Q9Y2P8 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
RCL1Q9Y2P8 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
RCL1Q9Y2P8 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
RCL1Q9Y2P8 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
RCL1Q9Y2P8 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
RCL1Q9Y2P8 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC14.98□□□□□ -0.01
RCL1Q9Y2P8 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
RCL1Q9Y2P8 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC14.98□□□□□ -0.01
RCL1Q9Y2P8 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC14.98□□□□□ -0.01
RCL1Q9Y2P8 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC14.98□□□□□ -0.01
RCL1Q9Y2P8 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC14.98□□□□□ -0.01
RCL1Q9Y2P8 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC14.98□□□□□ -0.01
RCL1Q9Y2P8 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC14.98□□□□□ -0.01
RCL1Q9Y2P8 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
RCL1Q9Y2P8 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC14.98□□□□□ -0.01
RCL1Q9Y2P8 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
RCL1Q9Y2P8 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
RCL1Q9Y2P8 HARS-201ENST00000307633 1780 ntTSL 2 BASIC14.98□□□□□ -0.01
RCL1Q9Y2P8 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
RCL1Q9Y2P8 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC14.98□□□□□ -0.01
RCL1Q9Y2P8 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
RCL1Q9Y2P8 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
RCL1Q9Y2P8 NME9-203ENST00000383180 2133 ntTSL 2 BASIC14.98□□□□□ -0.01
RCL1Q9Y2P8 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
RCL1Q9Y2P8 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
RCL1Q9Y2P8 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
RCL1Q9Y2P8 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC14.98□□□□□ -0.01
RCL1Q9Y2P8 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
RCL1Q9Y2P8 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
RCL1Q9Y2P8 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
RCL1Q9Y2P8 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
RCL1Q9Y2P8 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC14.97□□□□□ -0.01
RCL1Q9Y2P8 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
RCL1Q9Y2P8 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
RCL1Q9Y2P8 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
RCL1Q9Y2P8 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC14.97□□□□□ -0.01
RCL1Q9Y2P8 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
RCL1Q9Y2P8 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
RCL1Q9Y2P8 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC14.97□□□□□ -0.01
RCL1Q9Y2P8 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
RCL1Q9Y2P8 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC14.97□□□□□ -0.01
RCL1Q9Y2P8 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
RCL1Q9Y2P8 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
RCL1Q9Y2P8 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
RCL1Q9Y2P8 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC14.97□□□□□ -0.01
RCL1Q9Y2P8 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
RCL1Q9Y2P8 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms