Protein–RNA interactions for Protein: Q9XRX5

HHLA3, HERV-H LTR-associating protein 3, humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HHLA3Q9XRX5 TSPY23P-201ENST00000440136 739 ntBASIC13.43□□□□□ -0.26
HHLA3Q9XRX5 AL355355.2-201ENST00000442321 338 ntBASIC13.43□□□□□ -0.26
HHLA3Q9XRX5 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC13.43□□□□□ -0.26
HHLA3Q9XRX5 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC13.43□□□□□ -0.26
HHLA3Q9XRX5 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC13.43□□□□□ -0.26
HHLA3Q9XRX5 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC13.43□□□□□ -0.26
HHLA3Q9XRX5 MIR6786-201ENST00000616843 113 ntBASIC13.43□□□□□ -0.26
HHLA3Q9XRX5 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC13.43□□□□□ -0.26
HHLA3Q9XRX5 AC130371.2-201ENST00000619443 611 ntBASIC13.43□□□□□ -0.26
HHLA3Q9XRX5 AL049637.2-201ENST00000641778 930 ntBASIC13.43□□□□□ -0.26
HHLA3Q9XRX5 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
HHLA3Q9XRX5 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
HHLA3Q9XRX5 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC13.43□□□□□ -0.26
HHLA3Q9XRX5 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
HHLA3Q9XRX5 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC13.43□□□□□ -0.26
HHLA3Q9XRX5 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
HHLA3Q9XRX5 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC13.43□□□□□ -0.26
HHLA3Q9XRX5 OR6D1P-202ENST00000641007 5290 ntBASIC13.43□□□□□ -0.26
HHLA3Q9XRX5 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
HHLA3Q9XRX5 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC13.42□□□□□ -0.26
HHLA3Q9XRX5 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
HHLA3Q9XRX5 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
HHLA3Q9XRX5 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
HHLA3Q9XRX5 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
HHLA3Q9XRX5 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC13.42□□□□□ -0.26
HHLA3Q9XRX5 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC13.42□□□□□ -0.26
HHLA3Q9XRX5 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
HHLA3Q9XRX5 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
HHLA3Q9XRX5 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC13.42□□□□□ -0.26
HHLA3Q9XRX5 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC13.42□□□□□ -0.26
HHLA3Q9XRX5 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
HHLA3Q9XRX5 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
HHLA3Q9XRX5 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
HHLA3Q9XRX5 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC13.42□□□□□ -0.26
HHLA3Q9XRX5 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
HHLA3Q9XRX5 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
HHLA3Q9XRX5 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
HHLA3Q9XRX5 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC13.42□□□□□ -0.26
HHLA3Q9XRX5 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC13.42□□□□□ -0.26
HHLA3Q9XRX5 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
HHLA3Q9XRX5 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC13.42□□□□□ -0.26
HHLA3Q9XRX5 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
HHLA3Q9XRX5 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
HHLA3Q9XRX5 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
HHLA3Q9XRX5 FAM207BP-201ENST00000447172 505 ntBASIC13.42□□□□□ -0.26
HHLA3Q9XRX5 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC13.42□□□□□ -0.26
HHLA3Q9XRX5 AC091390.4-202ENST00000476426 537 ntBASIC13.42□□□□□ -0.26
HHLA3Q9XRX5 AC008550.1-201ENST00000511500 884 ntBASIC13.42□□□□□ -0.26
HHLA3Q9XRX5 PRSS44-201ENST00000515154 1146 ntBASIC13.42□□□□□ -0.26
HHLA3Q9XRX5 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC13.42□□□□□ -0.26
HHLA3Q9XRX5 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
HHLA3Q9XRX5 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC13.42□□□□□ -0.26
HHLA3Q9XRX5 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC13.42□□□□□ -0.26
HHLA3Q9XRX5 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC13.42□□□□□ -0.26
HHLA3Q9XRX5 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC13.42□□□□□ -0.26
HHLA3Q9XRX5 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC13.42□□□□□ -0.26
HHLA3Q9XRX5 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
HHLA3Q9XRX5 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
HHLA3Q9XRX5 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
HHLA3Q9XRX5 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
HHLA3Q9XRX5 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
HHLA3Q9XRX5 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
HHLA3Q9XRX5 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
HHLA3Q9XRX5 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC13.42□□□□□ -0.26
HHLA3Q9XRX5 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
HHLA3Q9XRX5 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC13.42□□□□□ -0.26
HHLA3Q9XRX5 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC13.42□□□□□ -0.26
HHLA3Q9XRX5 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC13.42□□□□□ -0.26
HHLA3Q9XRX5 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC13.42□□□□□ -0.26
HHLA3Q9XRX5 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
HHLA3Q9XRX5 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
HHLA3Q9XRX5 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
HHLA3Q9XRX5 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
HHLA3Q9XRX5 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
HHLA3Q9XRX5 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
HHLA3Q9XRX5 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC13.41□□□□□ -0.26
HHLA3Q9XRX5 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
HHLA3Q9XRX5 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
HHLA3Q9XRX5 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
HHLA3Q9XRX5 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
HHLA3Q9XRX5 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
HHLA3Q9XRX5 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC13.41□□□□□ -0.26
HHLA3Q9XRX5 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
HHLA3Q9XRX5 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
HHLA3Q9XRX5 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
HHLA3Q9XRX5 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
HHLA3Q9XRX5 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC13.41□□□□□ -0.26
HHLA3Q9XRX5 Z99916.2-201ENST00000604037 246 ntBASIC13.41□□□□□ -0.26
HHLA3Q9XRX5 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
HHLA3Q9XRX5 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC13.41□□□□□ -0.26
HHLA3Q9XRX5 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
HHLA3Q9XRX5 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
HHLA3Q9XRX5 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
HHLA3Q9XRX5 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
HHLA3Q9XRX5 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC13.41□□□□□ -0.26
HHLA3Q9XRX5 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
HHLA3Q9XRX5 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
HHLA3Q9XRX5 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
HHLA3Q9XRX5 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
HHLA3Q9XRX5 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms