Protein–RNA interactions for Protein: Q9UN74

PCDHA4, Protocadherin alpha-4, humanhuman

Predictions only

Length 947 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4Q9UN74 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
PCDHA4Q9UN74 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC20.9■□□□□ 0.94
PCDHA4Q9UN74 AL031133.1-201ENST00000406807 723 ntBASIC20.9■□□□□ 0.94
PCDHA4Q9UN74 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
PCDHA4Q9UN74 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
PCDHA4Q9UN74 ZNF444P1-201ENST00000559497 298 ntBASIC20.9■□□□□ 0.94
PCDHA4Q9UN74 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC20.9■□□□□ 0.94
PCDHA4Q9UN74 TEN1-204ENST00000588202 862 ntTSL 3 BASIC20.9■□□□□ 0.94
PCDHA4Q9UN74 AC008687.5-201ENST00000593746 558 ntBASIC20.9■□□□□ 0.94
PCDHA4Q9UN74 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC20.9■□□□□ 0.94
PCDHA4Q9UN74 SPEG-225ENST00000617028 815 ntTSL 5 BASIC20.9■□□□□ 0.94
PCDHA4Q9UN74 LITAF-220ENST00000620789 692 ntTSL 5 BASIC20.9■□□□□ 0.94
PCDHA4Q9UN74 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
PCDHA4Q9UN74 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC20.9■□□□□ 0.94
PCDHA4Q9UN74 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
PCDHA4Q9UN74 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC20.9■□□□□ 0.94
PCDHA4Q9UN74 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC20.89■□□□□ 0.94
PCDHA4Q9UN74 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC20.89■□□□□ 0.94
PCDHA4Q9UN74 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
PCDHA4Q9UN74 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC20.89■□□□□ 0.94
PCDHA4Q9UN74 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.94
PCDHA4Q9UN74 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
PCDHA4Q9UN74 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
PCDHA4Q9UN74 AL096828.2-201ENST00000567259 1965 ntBASIC20.89■□□□□ 0.93
PCDHA4Q9UN74 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
PCDHA4Q9UN74 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
PCDHA4Q9UN74 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC20.89■□□□□ 0.93
PCDHA4Q9UN74 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC20.89■□□□□ 0.93
PCDHA4Q9UN74 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC20.89■□□□□ 0.93
PCDHA4Q9UN74 KIRREL3-AS3-201ENST00000404882 831 ntBASIC20.89■□□□□ 0.93
PCDHA4Q9UN74 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC20.89■□□□□ 0.93
PCDHA4Q9UN74 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC20.89■□□□□ 0.93
PCDHA4Q9UN74 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC20.89■□□□□ 0.93
PCDHA4Q9UN74 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
PCDHA4Q9UN74 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
PCDHA4Q9UN74 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC20.89■□□□□ 0.93
PCDHA4Q9UN74 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
PCDHA4Q9UN74 NARF-204ENST00000390006 1766 ntTSL 2 BASIC20.89■□□□□ 0.93
PCDHA4Q9UN74 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC20.89■□□□□ 0.93
PCDHA4Q9UN74 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
PCDHA4Q9UN74 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
PCDHA4Q9UN74 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
PCDHA4Q9UN74 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
PCDHA4Q9UN74 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
PCDHA4Q9UN74 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
PCDHA4Q9UN74 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC20.88■□□□□ 0.93
PCDHA4Q9UN74 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
PCDHA4Q9UN74 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC20.88■□□□□ 0.93
PCDHA4Q9UN74 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
PCDHA4Q9UN74 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
PCDHA4Q9UN74 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
PCDHA4Q9UN74 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
PCDHA4Q9UN74 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
PCDHA4Q9UN74 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
PCDHA4Q9UN74 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC20.88■□□□□ 0.93
PCDHA4Q9UN74 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
PCDHA4Q9UN74 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
PCDHA4Q9UN74 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
PCDHA4Q9UN74 HES2-202ENST00000377836 507 ntTSL 2 BASIC20.88■□□□□ 0.93
PCDHA4Q9UN74 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC20.88■□□□□ 0.93
PCDHA4Q9UN74 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC20.88■□□□□ 0.93
PCDHA4Q9UN74 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC20.88■□□□□ 0.93
PCDHA4Q9UN74 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
PCDHA4Q9UN74 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC20.88■□□□□ 0.93
PCDHA4Q9UN74 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
PCDHA4Q9UN74 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
PCDHA4Q9UN74 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC20.88■□□□□ 0.93
PCDHA4Q9UN74 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
PCDHA4Q9UN74 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
PCDHA4Q9UN74 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC20.88■□□□□ 0.93
PCDHA4Q9UN74 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC20.88■□□□□ 0.93
PCDHA4Q9UN74 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
PCDHA4Q9UN74 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
PCDHA4Q9UN74 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
PCDHA4Q9UN74 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
PCDHA4Q9UN74 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
PCDHA4Q9UN74 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
PCDHA4Q9UN74 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
PCDHA4Q9UN74 AC093010.1-201ENST00000473625 1624 ntBASIC20.87■□□□□ 0.93
PCDHA4Q9UN74 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC20.87■□□□□ 0.93
PCDHA4Q9UN74 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
PCDHA4Q9UN74 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
PCDHA4Q9UN74 KRT18P48-201ENST00000434763 852 ntBASIC20.87■□□□□ 0.93
PCDHA4Q9UN74 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC20.87■□□□□ 0.93
PCDHA4Q9UN74 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC20.87■□□□□ 0.93
PCDHA4Q9UN74 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
PCDHA4Q9UN74 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC20.87■□□□□ 0.93
PCDHA4Q9UN74 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC20.87■□□□□ 0.93
PCDHA4Q9UN74 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC20.87■□□□□ 0.93
PCDHA4Q9UN74 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
PCDHA4Q9UN74 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
PCDHA4Q9UN74 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
PCDHA4Q9UN74 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC20.87■□□□□ 0.93
PCDHA4Q9UN74 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
PCDHA4Q9UN74 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC20.87■□□□□ 0.93
PCDHA4Q9UN74 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
PCDHA4Q9UN74 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
PCDHA4Q9UN74 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
PCDHA4Q9UN74 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
PCDHA4Q9UN74 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms