Protein–RNA interactions for Protein: Q9P2X8

LINC00474, Putative uncharacterized protein encoded by LINC00474, humanhuman

Predictions only

Length 69 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00474Q9P2X8 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
LINC00474Q9P2X8 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
LINC00474Q9P2X8 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
LINC00474Q9P2X8 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
LINC00474Q9P2X8 AL023284.2-201ENST00000405850 579 ntBASIC11.96□□□□□ -0.49
LINC00474Q9P2X8 AC087499.1-201ENST00000418141 1075 ntBASIC11.96□□□□□ -0.49
LINC00474Q9P2X8 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
LINC00474Q9P2X8 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC11.96□□□□□ -0.49
LINC00474Q9P2X8 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC11.96□□□□□ -0.49
LINC00474Q9P2X8 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC11.96□□□□□ -0.49
LINC00474Q9P2X8 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
LINC00474Q9P2X8 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
LINC00474Q9P2X8 RPS20-210ENST00000523936 899 ntTSL 2 BASIC11.96□□□□□ -0.49
LINC00474Q9P2X8 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC11.96□□□□□ -0.49
LINC00474Q9P2X8 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC11.96□□□□□ -0.49
LINC00474Q9P2X8 WWOX-216ENST00000569818 525 ntBASIC11.96□□□□□ -0.49
LINC00474Q9P2X8 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC11.96□□□□□ -0.49
LINC00474Q9P2X8 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC11.96□□□□□ -0.49
LINC00474Q9P2X8 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC11.96□□□□□ -0.49
LINC00474Q9P2X8 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC11.96□□□□□ -0.49
LINC00474Q9P2X8 AC068587.9-201ENST00000641814 219 ntBASIC11.96□□□□□ -0.49
LINC00474Q9P2X8 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC11.96□□□□□ -0.49
LINC00474Q9P2X8 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC11.96□□□□□ -0.49
LINC00474Q9P2X8 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC11.96□□□□□ -0.49
LINC00474Q9P2X8 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC11.96□□□□□ -0.49
LINC00474Q9P2X8 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
LINC00474Q9P2X8 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
LINC00474Q9P2X8 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
LINC00474Q9P2X8 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC11.96□□□□□ -0.5
LINC00474Q9P2X8 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
LINC00474Q9P2X8 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
LINC00474Q9P2X8 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC11.96□□□□□ -0.5
LINC00474Q9P2X8 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC11.96□□□□□ -0.5
LINC00474Q9P2X8 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
LINC00474Q9P2X8 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
LINC00474Q9P2X8 AC139713.2-201ENST00000641328 2723 ntBASIC11.95□□□□□ -0.5
LINC00474Q9P2X8 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
LINC00474Q9P2X8 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC11.95□□□□□ -0.5
LINC00474Q9P2X8 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
LINC00474Q9P2X8 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC11.95□□□□□ -0.5
LINC00474Q9P2X8 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC11.95□□□□□ -0.5
LINC00474Q9P2X8 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC11.95□□□□□ -0.5
LINC00474Q9P2X8 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
LINC00474Q9P2X8 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC11.95□□□□□ -0.5
LINC00474Q9P2X8 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
LINC00474Q9P2X8 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC11.95□□□□□ -0.5
LINC00474Q9P2X8 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC11.95□□□□□ -0.5
LINC00474Q9P2X8 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
LINC00474Q9P2X8 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC11.95□□□□□ -0.5
LINC00474Q9P2X8 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
LINC00474Q9P2X8 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
LINC00474Q9P2X8 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC11.95□□□□□ -0.5
LINC00474Q9P2X8 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC11.95□□□□□ -0.5
LINC00474Q9P2X8 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
LINC00474Q9P2X8 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
LINC00474Q9P2X8 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC11.95□□□□□ -0.5
LINC00474Q9P2X8 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC11.95□□□□□ -0.5
LINC00474Q9P2X8 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC11.95□□□□□ -0.5
LINC00474Q9P2X8 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC11.95□□□□□ -0.5
LINC00474Q9P2X8 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC11.95□□□□□ -0.5
LINC00474Q9P2X8 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC11.95□□□□□ -0.5
LINC00474Q9P2X8 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC11.95□□□□□ -0.5
LINC00474Q9P2X8 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC11.95□□□□□ -0.5
LINC00474Q9P2X8 NEK4P2-201ENST00000580004 1012 ntBASIC11.95□□□□□ -0.5
LINC00474Q9P2X8 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC11.95□□□□□ -0.5
LINC00474Q9P2X8 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC11.95□□□□□ -0.5
LINC00474Q9P2X8 AC010947.1-201ENST00000623454 693 ntBASIC11.95□□□□□ -0.5
LINC00474Q9P2X8 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC11.95□□□□□ -0.5
LINC00474Q9P2X8 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
LINC00474Q9P2X8 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC11.95□□□□□ -0.5
LINC00474Q9P2X8 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
LINC00474Q9P2X8 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC11.95□□□□□ -0.5
LINC00474Q9P2X8 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
LINC00474Q9P2X8 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
LINC00474Q9P2X8 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC11.95□□□□□ -0.5
LINC00474Q9P2X8 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC11.95□□□□□ -0.5
LINC00474Q9P2X8 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
LINC00474Q9P2X8 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
LINC00474Q9P2X8 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC11.95□□□□□ -0.5
LINC00474Q9P2X8 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
LINC00474Q9P2X8 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC11.95□□□□□ -0.5
LINC00474Q9P2X8 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
LINC00474Q9P2X8 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC11.95□□□□□ -0.5
LINC00474Q9P2X8 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC11.95□□□□□ -0.5
LINC00474Q9P2X8 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
LINC00474Q9P2X8 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
LINC00474Q9P2X8 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
LINC00474Q9P2X8 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
LINC00474Q9P2X8 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
LINC00474Q9P2X8 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
LINC00474Q9P2X8 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
LINC00474Q9P2X8 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC11.94□□□□□ -0.5
LINC00474Q9P2X8 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
LINC00474Q9P2X8 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
LINC00474Q9P2X8 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
LINC00474Q9P2X8 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC11.94□□□□□ -0.5
LINC00474Q9P2X8 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
LINC00474Q9P2X8 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC11.94□□□□□ -0.5
LINC00474Q9P2X8 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
LINC00474Q9P2X8 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms